Erigeron canadensis (horseweed): 122591654
Help
Entry
122591654 CDS
T07610
Name
(RefSeq) cell division cycle 20.1, cofactor of APC complex-like
KO
K03363
cell division cycle 20, cofactor of APC complex
Organism
ecad
Erigeron canadensis (horseweed)
Pathway
ecad04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
ecad00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
122591654
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ecad04121
]
122591654
03036 Chromosome and associated proteins [BR:
ecad03036
]
122591654
Ubiquitin system [BR:
ecad04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
APC/C
Target recognizing subunit
122591654
Chromosome and associated proteins [BR:
ecad03036
]
Eukaryotic type
Sister chromatid separation proteins
APC/C complex
122591654
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40
WD40_Prp19
Beta-prop_EML_2
WD40_WDHD1_1st
ANAPC4_WD40
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
EIF3I
WDR55
Beta-prop_EML
Beta-prop_WDR19_1st
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_IFT140_1st
Beta-prop_RIG_2nd
Beta-prop_SPT8
eIF2A
Beta-prop_HPS5
Beta-prop_EIPR1
Beta-prop_RIG_1st
WD40_MABP1-WDR62_1st
Beta-prop_WDR35_TULP_N
Beta-prop_SCAP
Beta-prop_WDR75_1st
RMC1_N
WDR54
WDR90_beta-prop_4th
Beta-prop_IFT122_1st
DUF5888
Beta-prop_WDR19_2nd
Motif
Other DBs
NCBI-GeneID:
122591654
NCBI-ProteinID:
XP_043619845
LinkDB
All DBs
Position
3:20636684..20640940
Genome browser
AA seq
440 aa
AA seq
DB search
MCSVYCDNSDFVALLCVMVLHLVFLLWFFDINLRLDRFIPNRSAMDFNFANYMLTGGKVQ
KKSSSPSPWGEDYLEMLAEVFNMNRKRILSFKNKPPNETSPPSLEPYVKPRRYISKSDRT
LDTPDLVDDYYLKLVDWGSSNSIAIGLGNSIYLLDASDKSTPYEIQLADENSGPVTSVKW
APNGIHVAVGLNNSEVQLWDVTTAQMVRLRIQGHHSRVGSLDWNHDILTTGSMDGLINNN
DVRINSNIIGTYRGHNQEVCGLKWSPSGQQLASGGNDNLVYIWNLSSNQRVHRFSGHTSA
VKALDWCPFQRNLLASGGGVDDQCIKFWNSNTGACLNSVDTGSQVSCLLWSRHERELLSS
HGFSDNELTLWKYPSMNKLTELREHTLRVLHMTQSPDGYRVASLGADETLRFWNVFGTPH
VVKKEIKKHAEPFAYAALIR
NT seq
1323 nt
NT seq
+upstream
nt +downstream
nt
atgtgctctgtatattgtgataatagtgattttgtggcactattatgtgtcatggtgtta
caccttgtctttttgttgtggttttttgatataaatttgcggctggacagattcatcccc
aatcgttctgcaatggattttaactttgcgaattacatgcttacgggtgggaaggttcaa
aagaaaagctcctctccttcaccatggggagaagactacctagagatgcttgctgaagtt
ttcaacatgaataggaaacggatcctttctttcaaaaacaagccgcctaatgagacttct
ccaccttccctagagccatatgtgaagcctaggagatatatttctaaatcagataggact
ttggatacacctgatcttgtggatgactactatttgaaattagttgattggggtagcagc
aattctattgctatcggtcttggaaatagtatctatctgttggatgcatcagacaagtca
accccttatgaaattcaattagctgatgaaaacagtggcccagttacaagtgtaaagtgg
gcacctaatggaatacatgtagctgtcggtttgaacaattctgaggttcagctgtgggat
gttactaccgcacaaatggtacgtttgaggatacaaggccatcattcaagggtcggatct
ctcgactggaatcatgatatcttgacaaccggcagcatggacggtttgataaataacaat
gatgttagaattaactcaaatattattgggacatacagagggcataatcaagaggtgtgt
ggattaaaatggtcaccatcaggtcaacaactagcgagcggtggcaacgacaaccttgtc
tatatatggaacctttcttctaatcaaagagtccaccgcttctcaggccatacatctgct
gtaaaagctctagattggtgtccgtttcagagaaatttactagcttctggtggcggagta
gatgatcagtgcatcaagttttggaattccaacacaggtgcgtgcttgaattcagtggac
acagggtcacaggtgtcatgcttgctttggagtagacacgaacgtgaacttttgagctct
catggtttcagtgacaacgaactcactctctggaagtatccttctatgaataagttgact
gaactccgtgaacatactttaagagtgctgcatatgactcagagtccagatgggtatagg
gttgcatctctaggtgctgatgagacgctgcgattttggaacgtgtttggtacaccccat
gtggtcaagaaggaaattaagaaacacgcagaaccatttgcttatgctgcacttattaga
tga
DBGET
integrated database retrieval system
