Erigeron canadensis (horseweed): 122591938
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Entry
122591938 CDS
T07610
Name
(RefSeq) FACT complex subunit SSRP1-like
KO
K09272
FACT complex subunit SSRP1/POB3
Organism
ecad
Erigeron canadensis (horseweed)
Brite
KEGG Orthology (KO) [BR:
ecad00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ecad03000
]
122591938
03036 Chromosome and associated proteins [BR:
ecad03036
]
122591938
Transcription factors [BR:
ecad03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG2-related
122591938
Chromosome and associated proteins [BR:
ecad03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
FACT complex
122591938
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
POB3_N
Rttp106-like_middle
SSrecog
HMG_box
GSKIP_dom
HMG_box_2
RGS_DHEX
Motif
Other DBs
NCBI-GeneID:
122591938
NCBI-ProteinID:
XP_043620096
LinkDB
All DBs
Position
3:complement(32488535..32491832)
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AA seq
495 aa
AA seq
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MREFQSYGEITFSKENICWRKDSMTRTIDLKIGNIEKATFMEYPGGDYCLEIHSTDGYRY
KFGGFEDEHVVWLNAYFESHQISFTRSQVYVGGMNWGELDLTDHHLSLVHGQKQSLMQLS
LDDVSRIERTYEQVKLKFHKDGNVSKRGFYPREFVFGFTGTEEADEFKEKTMGSLRNLVE
KKNERKKPIDAFNNVSIAQLRSIYNVRFYLKNLKLLGPEVKHKNEISYVVVLCLDPPLYT
NDGSDEHPYLTLEGDAVGENLVSRLEDCIHEEAIRHSNYRSRDGSYAVDCSFLNEEGHLY
PLDKGFLCLTTNPIHIKEVAFVKGRVGHIKVHVSLKTRQSLFFCDIKTDERHRLLDRMKQ
SGLHIREPQHETKISKGKDVAESSQSERPSMVFCEEAQKRLEEEGLPIEFDKLQKRIARQ
WDALPEHVKSYYRGKDAKRRRNRTVYDKKLRKKKGLTMVYESGCASTSSALLFLRACLFV
CFFVWIKCLSEFSVS
NT seq
1488 nt
NT seq
+upstream
nt +downstream
nt
atgagggaatttcagagttatggggagattactttcagtaaagaaaacatatgttggaga
aaggatagcatgacaagaactattgatttgaaaattgggaacatagagaaagcaacattc
atggaatatccaggaggagactactgcttggaaatccatagcactgatggttacagatac
aaatttgggggttttgaggacgagcatgttgtgtggttgaacgcttatttcgaaagccac
cagatatcatttacacgatcgcaagtctatgttggtggtatgaattggggagagctagat
ctcacggaccaccatctttcattagtccatggacaaaagcaatcgctcatgcaactttct
ttggatgatgtttctcgcatagagagaacctatgagcaagtgaagttaaagtttcacaaa
gatgggaatgtttctaaaaggggtttttatcctagagagtttgtttttggctttactgga
acggaagaagcagatgagtttaaagaaaaaacaatgggatcgctgcgtaatctagttgaa
aagaagaacgaacgaaagaaacctattgatgcgtttaataatgtgtccattgctcaatta
aggagtatatacaatgtgagattttacctgaaaaacttgaagctgctgggacctgaagta
aaacacaagaatgaaatttcgtatgttgtggtattgtgtctggatcccccgttatacact
aatgatggctctgatgagcatccatacctgacactcgagggtgatgctgttggggagaat
ctagttagccgcttggaagactgtattcatgaggaagcaatcagacactcaaactacaga
agtcgggatggatcttatgcagtagattgctcattccttaacgaagagggacacctgtac
ccgttagataaggggtttttgtgtttgacaacaaatccaattcacatcaaggaagtggcc
tttgtgaagggacgagtggggcatatcaaagttcatgtttccctgaaaacaagacagtcc
ctctttttctgtgatattaagacagatgaacgtcataggcttcttgatagaatgaagcaa
tcaggtttacacatcagggaaccacaacatgagacgaaaatcagcaaagggaaagatgtg
gctgaaagttcacagtcagaaagaccttcaatggtcttctgtgaggaagcacaaaagcgt
cttgaagaagagggacttccaattgaatttgataaacttcagaaacgtattgcgcggcag
tgggatgctttaccagaacatgtgaagtcatattacagaggtaaggatgcgaaaaggaga
cggaacagaacagtttatgacaaaaagttaaggaagaagaagggtttaacaatggtatat
gaatctggttgtgcaagtacatcttctgctcttctgtttcttagggcatgtttgtttgtt
tgttttttcgtgtggattaagtgtctgtctgaatttagtgtgtcttag
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