Erigeron canadensis (horseweed): 122592120
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Entry
122592120 CDS
T07610
Name
(RefSeq) two-component response regulator ORR21-like
KO
K14491
GARP family transcription factor, ARR-B subfamily
Organism
ecad
Erigeron canadensis (horseweed)
Pathway
ecad04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
ecad00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
122592120
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ecad03000
]
122592120
Transcription factors [BR:
ecad03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters Myb, Myb-like factors
122592120
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Response_reg
Myb_DNA-binding
ORC_WH_C
Motif
Other DBs
NCBI-GeneID:
122592120
NCBI-ProteinID:
XP_043620265
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All DBs
Position
3:39656891..39658468
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AA seq
321 aa
AA seq
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MKHGDSFNPNGLRVLLVENNPTTILLYSKMLHSCNYQVTHCSGPTEALSLIRSNENKFDI
VLTEVSFFPDMNGIKFLEIIVQETDLPVVIVSAEERTSMVFKCVTNGACDYILKPVPLEV
FKVLWQHVARKEFLRLGSLKQIDYVGQMNPLDRVENREPGSSNSGEEKEVSGSPDSVPLD
YEGNDREDEQEKVRGSKKQRMVWTDELHLLFVRAVKQLGIDNAVPKKVLELMNVPGLRRE
NVASHLQKYRLSLKKLKEHMPESFSVPHSSPAAPAHEGMFLSTPPIAEIQQQQLPVEYND
VHPIIFPFHEQDPLFNQLDYV
NT seq
966 nt
NT seq
+upstream
nt +downstream
nt
atgaaacatggagattcttttaatccgaatggccttagagttcttcttgttgaaaacaat
cccactaccatcttactttattccaagatgctgcattcttgcaactatcaagtgacacat
tgttcagggccaacagaagcattatctttgataagaagtaacgaaaacaagttcgatatt
gtgttaacagaagttagcttctttccggatatgaatggaatcaagtttcttgaaatcatt
gttcaagaaaccgatttacccgttgttattgtatcagcagaagagagaaccagtatggtt
ttcaagtgtgtaaccaacggtgcatgcgattacatactaaaaccggttccattagaggtt
tttaaggtgttatggcagcatgttgcacgtaaggaatttcttcgtttggggtcattgaaa
caaattgattatgtgggacagatgaacccgcttgatagggtagagaatagagaacctggt
tcaagtaattctggtgaagaaaaagaggtaagtggaagcccggatagtgttccattggat
tatgagggaaacgatagggaggatgagcaagagaaggtccgaggtagtaaaaagcaacga
atggtttggaccgacgagcttcatctattatttgtcagagctgtgaaacaacttggaatt
gataatgctgtcccgaaaaaggtcttggaactgatgaatgtaccagggctcaggagggaa
aatgttgcaagccatttacagaaatacaggctaagcctcaaaaagctaaaagagcacatg
ccagaaagtttcagcgtgccacattctagcccagcagctccagcgcacgaaggcatgttt
ctaagtactcctccgatcgctgaaatacagcaacagcaacttccagtggagtacaatgac
gtccacccaattattttcccttttcatgagcaagatcctcttttcaatcaactagattat
gtctag
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