Erigeron canadensis (horseweed): 122592124
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Entry
122592124 CDS
T07610
Name
(RefSeq) long chain acyl-CoA synthetase 1-like
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
ecad
Erigeron canadensis (horseweed)
Pathway
ecad00061
Fatty acid biosynthesis
ecad00071
Fatty acid degradation
ecad01100
Metabolic pathways
ecad01212
Fatty acid metabolism
ecad04146
Peroxisome
Module
ecad_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
ecad00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
122592124
00071 Fatty acid degradation
122592124
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
122592124
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
ecad01004
]
122592124
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ecad04147
]
122592124
Enzymes [BR:
ecad01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
122592124
Lipid biosynthesis proteins [BR:
ecad01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
122592124
Exosome [BR:
ecad04147
]
Exosomal proteins
Exosomal proteins of breast milk
122592124
Exosomal proteins of breast cancer cells
122592124
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-GeneID:
122592124
NCBI-ProteinID:
XP_043620268
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All DBs
Position
3:complement(40015037..40019814)
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AA seq
655 aa
AA seq
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MNKQFAVKVEEGRKGDPSVGPIYRYHTSKQSFPPLDSHFKTTWDVFRSSVEKYPNNRILG
WRELVNGKWGPYVWKTYKVVYEEVLHVAYAIRASGLQPGCKVGIYGSNCPQWIVAMEACN
AQNCICVPLYDTLGAGAVNFILEHAEVDIVFVQDKKVKQLLDPECTHTRHLKAIVCFTSM
TAEEKEMADSIGIKSFSWNDFLQMGSEHPSELQTPQPSDICTIMYTSGTTGKPKGVILTH
ENVITMICGIDLMMEQFEEKMTVDDVYLSFLPLAHVFDRVIEEYFIRKGASVGFYHGDIN
ALKDDMMELKPTFLAGVPRVLERIHEGVLKGLEELNPRRRKIFDILYNYKLKWMKLGYKQ
KYASPLADMLAFRKVKNNLGGRIRCIVSAGAPLNPEVEEFLRVTSCALVLQGYGLTETCG
LATAAIPDELSMVGTVGPPFLFKELRLEELPEMSYDPLADPPRGEICIRGKSPFAGYYKN
PELTDEVMKDGWFHTGDIGEMLPNGALKIIDRKKHLIKLSQGEYVALEHLEKLYAITPIV
EEIWVYGNSFKSSLVAVVVPNQEHALKWADRNGHKTTFSDLCTLSQLQDYIISELKSTAE
RFKLNGFEHIKGVIVEPETFEGERGFLTPTLKKKRDRMQDHYKIQIDNVYRGLNK
NT seq
1968 nt
NT seq
+upstream
nt +downstream
nt
atgaataagcagtttgctgtaaaggtggaggagggaagaaaaggtgacccatctgttggt
ccgatttatcgttatcatacttctaaacaatccttcccacctctggattctcacttcaaa
accacttgggatgtctttagatcatctgttgaaaagtatcctaacaacaggatccttgga
tggcgcgagctcgtgaatggaaagtggggaccatacgtttggaaaacttacaaggttgta
tatgaggaagttttgcatgttgcttatgccattcgagcctctggacttcaacctggttgt
aaagtgggaatttatggatcaaactgtcctcagtggattgtagcaatggaggcttgcaat
gcccagaactgcatttgtgtacctctctatgataccctcggggcaggggctgtaaatttt
atcttggagcatgccgaagttgatattgtttttgtgcaagataaaaaagttaaacaacta
ctggatccagagtgtacacatactcgacaccttaaggctattgtttgcttcacttcaatg
acagcagaagaaaaggaaatggcagattcaattgggataaaatctttctcatggaatgac
tttcttcaaatgggcagtgaacatccatcagagctgcagacaccacagccatctgacata
tgcacaattatgtacacgagtggcacaaccggaaaaccaaaaggtgttatattgactcat
gaaaacgttataacgatgatatgtggcattgatcttatgatggaacaattcgaagagaag
atgacggtggatgatgtttacttatccttcttacctctcgcccacgtctttgaccgtgta
attgaagaatattttattcgtaaaggtgcttctgttgggttctaccatggggatataaat
gctttaaaggatgatatgatggagctgaaaccaactttcttggctggagtacctcgtgtt
ttggaacgaattcatgaaggcgtgttgaaaggactagaagaacttaatccaaggaggagg
aaaatatttgacatactatacaactacaaacttaaatggatgaagttaggttataagcaa
aaatatgcatcacctttggcagatatgctggctttcagaaaggtaaagaacaatctgggt
ggtcggattcgttgtatagtatctgcaggagctccattaaaccctgaggtggaagagttc
ttgcgggttacatcctgtgcgcttgtgctacaaggatatggactgacagagacttgtggt
ctagccactgctgcaattccagatgaattgagcatggttgggactgtcggtcctcccttt
ttatttaaagaattacgtctagaggaacttccggaaatgagttatgaccctttggcagat
cctccacgtggtgaaatatgtattaggggaaaaagtccttttgccgggtactacaagaat
ccagagttgacagatgaggtgatgaaagatggatggtttcacacaggtgacataggggag
atgttaccaaatggagcgttgaaaattattgacaggaagaagcatctaataaagctgtca
caaggagagtatgttgcactggagcatttggagaaactctatgctatcactcccattgtt
gaagaaatttgggtatatgggaacagtttcaagtcttcattggtggcggtagttgtccca
aaccaagaacacgcattaaaatgggctgatcgcaatggtcataaaactaccttctctgac
ttgtgtacgctatctcagctacaggattacatcatcagtgaactcaaatcaactgcagaa
agattcaagctaaatggttttgaacatatcaagggtgtgattgtggaacccgaaaccttt
gaaggagaaaggggttttctgacaccaacacttaagaagaaaagagatagaatgcaagat
cattacaagatccaaatcgacaatgtttacagaggcttgaacaaataa
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