Erigeron canadensis (horseweed): 122592293
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Entry
122592293 CDS
T07610
Name
(RefSeq) diaminopimelate decarboxylase 1, chloroplastic-like
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
ecad
Erigeron canadensis (horseweed)
Pathway
ecad00300
Lysine biosynthesis
ecad00470
D-Amino acid metabolism
ecad01100
Metabolic pathways
ecad01110
Biosynthesis of secondary metabolites
ecad01230
Biosynthesis of amino acids
Module
ecad_M00527
Lysine biosynthesis, DAP aminotransferase pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
ecad00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
122592293
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
122592293
Enzymes [BR:
ecad01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
122592293
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Pox_Rif
Ubiquitin_IARS1
Motif
Other DBs
NCBI-GeneID:
122592293
NCBI-ProteinID:
XP_043620422
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All DBs
Position
3:complement(30177998..30183756)
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AA seq
482 aa
AA seq
DB search
MAAASSSSLHLQSLYFTKPINNTSIQTKPTSQISLKSLKSKTLSIKSVLSQTPQKTQKFN
HCFTKKDDGFLYVEGLKVQEIMESVEEKRPFYLYSKPQITRNVEAYKDALEGLNDSIIGY
AIKANNNFVVLKHLRSLGCGAVLVSGNELRLALQAGFDPTRCIFNGNGKLLEDLVLAAQE
GVFVNIDSEFDLDNIVSAARIAGKKVNVLLRINPDVDPQVHPYVATGNKNSKFGIRNEKL
QWFLDAVKSYPDELKLVGAHCHLGSTITKVDIFRDAAAIMVKFIDEIRAQGFEINYLNIG
GGLGIDYYHTGTVLPTPRDLIDTVRELVKSRNLTLIIEPGRSLIANTCCLVNRVTGVKTN
GTKNFIVIDGSMAELIRPSLYDAYQHIELVSPPPPDSPVTTFDVVGPVCESADFLGKNRD
LPAPARGAGLVVHDAGAYCMSMASTYNLKMRPPEYWVEEDGSLAKIRHGETFDDHMRFFE
GL
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
atggcggctgcttcatcttcttcacttcatctccaatccttatatttcaccaaacccatt
aacaatacttcaatccaaacaaaacccacatctcaaatctccttaaaatccttaaagtcc
aaaactttaagcatcaaatcagtcctatcacaaaccccccaaaaaacccagaaatttaac
cattgttttaccaagaaagatgatggctttttgtatgttgaaggacttaaagtccaagaa
atcatggaaagtgttgaagaaaaaaggccattttatctttatagtaaaccccaaattaca
agaaatgttgaggcttataaagatgctttggagggtttgaatgattccattattggttat
gctattaaggctaataataattttgtggttttgaaacatttgagaagtttgggatgtggg
gctgttttggttagtggaaatgaacttaggttggcacttcaagctggttttgatcctaca
aggtgtatttttaatggaaatgggaagcttttggaagatcttgttcttgctgctcaagaa
ggtgtatttgttaatatagatagtgaatttgatttggataacattgtatcggctgctaga
attgctggaaagaaggttaatgtactgcttcggatcaatccagatgttgaccctcaggtt
catccttatgttgcaacggggaataagaactccaaatttggtatcagaaacgagaagttg
caatggtttttagatgcggtgaagtcttatcctgatgaactgaagctagttggggctcat
tgccatcttgggtccaccattaccaaggttgacattttcagagatgctgctgccatcatg
gtgaagttcattgatgaaattcgagcccaagggtttgaaattaattacttgaatattgga
ggtggtcttgggattgactattaccatactggtaccgtccttcctacacccagagatctg
atcgacacagtacgggagctagtcaagtctcgaaaccttactctaatcattgaaccagga
aggtcactgatagcaaatacttgctgcttggttaatcgtgtgactggtgtaaaaacgaac
ggcacaaaaaacttcattgtgattgatggcagcatggccgagcttatccgtccaagcctg
tacgatgcttatcaacacatagaactggtttctcctccgccacctgattctcctgttaca
acatttgatgtggtgggcccggtttgtgaatcagctgattttttggggaagaacagggac
cttcctgcaccagccaggggtgctgggcttgtagttcatgatgcaggtgcctactgcatg
agcatggcttcaacttacaacctcaagatgcgcccacctgagtattgggttgaagaagat
ggatcgctagccaaaatcaggcacggggagacttttgatgatcatatgagattctttgag
ggactctag
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