KEGG   Erigeron canadensis (horseweed): 122592356
Entry
122592356         CDS       T07610                                 
Name
(RefSeq) autophagy-related protein 8C-like isoform X1
  KO
K08341  GABA(A) receptor-associated protein
Organism
ecad  Erigeron canadensis (horseweed)
Pathway
ecad04136  Autophagy - other
ecad04145  Phagocytosis
ecad04156  Integrated stress response (ISR) signaling pathway
Brite
KEGG Orthology (KO) [BR:ecad00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagocytosis
    122592356
   04136 Autophagy - other
    122592356
  09143 Cell growth and death
   04156 Integrated stress response (ISR) signaling pathway
    122592356
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:ecad04131]
    122592356
   04121 Ubiquitin system [BR:ecad04121]
    122592356
   03029 Mitochondrial biogenesis [BR:ecad03029]
    122592356
Membrane trafficking [BR:ecad04131]
 Autophagy
  Autophagosome formation proteins
   Atg8 conjugation proteins
    122592356
Ubiquitin system [BR:ecad04121]
 Ubiquitins and ubiquitin-like proteins
  Ubiquitin-like proteins (UBLs)
   122592356
Mitochondrial biogenesis [BR:ecad03029]
 Mitochondrial quality control factors
  Mitophagy factors
   Autophagy-related proteins
    122592356
SSDB
Motif
Pfam: ATG8 APG12
Other DBs
NCBI-GeneID: 122592356
NCBI-ProteinID: XP_043620496
LinkDB
Position
3:47307754..47310118
AA seq 139 aa
MFFSCLKFSESNQKAAMVKCSSFKLDHPLEKRQAESSRIREKYPDRVPVIVERAEKTDIP
DIDKKKYLVPADLTIGQFVYVVRKRIKLSPEKAIFVFVKNMLPPTAALMSAIYEEHKDED
GFLYTSYSGENTFGSLELQ
NT seq 420 nt   +upstreamnt  +downstreamnt
atgttttttagctgcttgaaattttcagaaagcaatcagaaggcagccatggttaaatgt
tcatccttcaagcttgatcaccctttggaaaagaggcaggctgaatcctctcgcatcagg
gaaaagtaccctgatagagtaccagtgattgttgagagagctgaaaaaaccgatattcct
gacatagacaaaaagaaatatctggtaccagcggacttgaccattggacagtttgtttat
gtggttcgtaagaggatcaagcttagccctgagaaagcaatatttgttttcgtcaagaac
atgctaccaccaacagctgctttgatgtctgcaatctatgaggaacataaggatgaagat
gggttcctctacacgagctacagtggcgaaaacacatttggatctctagaattgcagtaa

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