Erigeron canadensis (horseweed): 122592386
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Entry
122592386 CDS
T07610
Name
(RefSeq) scarecrow-like transcription factor PAT1
KO
K27748
scarecrow-like transcription factor PAT
Organism
ecad
Erigeron canadensis (horseweed)
Brite
KEGG Orthology (KO) [BR:
ecad00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ecad03000
]
122592386
Transcription factors [BR:
ecad03000
]
Eukaryotic type
Other transcription factors
GRAS
122592386
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Ortholog
Paralog
GFIT
Motif
Pfam:
GRAS
PAP1
Motif
Other DBs
NCBI-GeneID:
122592386
NCBI-ProteinID:
XP_043620534
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All DBs
Position
3:106355..109500
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AA seq
517 aa
AA seq
DB search
MQKSNNHHHHHQQPYYWTATTKQQHLDQTVYFSGGDVDGDGDVSQGSQQFSSDHTLPNNS
FSSNGSPSSLHSFQPEPLYHSPDDYTSHLNMDPHLQNTIRELETIIGIDQDFSSSNWGDG
GGCDTYNIIPADEECSIMEEIIARGDLKEALLACAKAVAQNNTALAEKLISMLRPFVSVS
GDPSQRLAAYMLEGLVARLYASGTSIYKSLKCKEPTGGELFSYMMLLYEACPYFKFGYLS
ANGAIAEATKNEDSIHIIDFQISQGGQWVTLIQALAARPGGPPKLRITGIDDSRNAFARG
GGLNIVGQRLAKLAESCKVPFEFYGVPVSVSDIEIQHLRVQPGEALAVNCALVLHHLPDE
TVHPQNHRDRLIRLIKSLSPKVVTLVEQESDVNTTNFFSRFQEAFSYYSAMFDSIDATLP
RDHRERINVEQHCLAGEIVNVLACEGTEREERHELLGMWRSRFAKAGFTPFPLSTYVNAT
IKTLLENYCDKYRLEERDGALFLGWMNRDLVSSCAWK
NT seq
1554 nt
NT seq
+upstream
nt +downstream
nt
atgcagaaatccaacaatcaccatcaccatcaccagcagccctattactggacagctact
actaagcagcaacatttggatcagactgtttatttttctggtggtgacgttgatggtgat
ggagatgtaagccaaggaagccaacagttttcttctgatcacacactccccaacaattct
ttctcttcaaatggcagccccagttcgcttcactccttccaacccgaaccactctatcat
tcccctgatgactacacctctcacctgaatatggaccctcatttgcagaacaccattaga
gaattagaaactatcattggaatcgatcaagacttttcttcttccaattggggtgatggt
ggtgggtgtgatacatataatatcattccagccgacgaggaatgtagcatcatggaagag
atcattgctagaggagatttaaaagaagctcttcttgcttgtgctaaagctgttgcacaa
aacaacaccgcacttgctgaaaagctaatatcaatgttacgccctttcgtctccgtttct
ggtgacccttcacaaagattagctgcttacatgttggaaggcctcgttgctcgtttgtat
gcctctggtacctctatctacaaatctttgaagtgcaaagagccaactggtggtgaactc
ttctcctatatgatgttactttacgaagcctgcccgtatttcaagtttggttatttatct
gcaaacggggccattgctgaagctaccaaaaatgaagactcgatccatataattgatttt
caaatttcacagggaggtcagtgggtgactcttatccaagctctagcggctagacctggt
ggtccaccaaagctacgcatcactggcattgatgattctagaaatgcatttgctaggggt
ggaggactcaatattgttggtcagagactggccaaactagcagaatcttgtaaagtacct
tttgagttttatggcgtgccagtttctgtttccgacattgagattcagcatcttagggtt
cagcctggggaggcattggcagttaattgtgcattggtgttgcatcacctaccagatgag
actgtgcatcctcagaatcacagggatagattgataaggctcatcaagagtttgtctcca
aaagttgtgactcttgttgagcaggaatctgatgtcaatacgacaaatttcttttccagg
tttcaagaggcattcagctactactcggccatgtttgactcgattgatgcaacgctacca
agagatcatagagaacggattaatgtagaacagcattgtcttgctggtgaaatagttaat
gtattagcatgtgaagggactgagagggaggagagacatgagcttctcgggatgtggagg
tcacgttttgctaaggctggattcactccattccctttgagcacctatgtaaatgccacc
atcaagaccctgcttgagaactactgtgacaagtatagacttgaagagagggatggcgct
ctgtttcttggatggatgaatcgagatctggtttcttcttgtgcttggaaatga
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