Erigeron canadensis (horseweed): 122592397
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Entry
122592397 CDS
T07610
Name
(RefSeq) dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 2 isoform X1
KO
K12667
dolichyl-diphosphooligosaccharide---protein glycosyltransferase subunit 2 (ribophorin II)
Organism
ecad
Erigeron canadensis (horseweed)
Pathway
ecad00510
N-Glycan biosynthesis
ecad00513
Various types of N-glycan biosynthesis
ecad01100
Metabolic pathways
ecad04141
Protein processing in endoplasmic reticulum
Module
ecad_M00072
N-glycosylation by oligosaccharyltransferase
Brite
KEGG Orthology (KO) [BR:
ecad00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00510 N-Glycan biosynthesis
122592397
00513 Various types of N-glycan biosynthesis
122592397
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
122592397
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Motif
Pfam:
Ribophorin_II
Ribophorin_II_3rd
Ribophorin_II_C
Ribophorin_II_2nd
DUF983
Motif
Other DBs
NCBI-GeneID:
122592397
NCBI-ProteinID:
XP_043620546
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Position
3:38172042..38179660
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AA seq
692 aa
AA seq
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MAVKLGCILILLLAVASICEAAAVFHPISESHRSAALELFSADGGSFSSLEEAYEALRTF
EVLGIHKSDLKEQTCSSVVDTLSTSSANIKDLYHALRVNGILQCKANKADIMGIASRLKV
AVKDATTLLDYYYSIGGLLLIKDQSSEVDILLENAEGIIRSIKALSQSDGRWRFSSNNPE
SSTYAAGVAFETISGVVSLAASAIDETLIGTLKKDIVKLFDSIEKYGQWTDDGAYYFDDK
HIDASTHQGPLSATSAVVRGLTTFASTSGSLSIPDDKILGLARFFLGIGTPGNSKDLYYQ
IDSLSCLENNRVSVPLILSLPASVLSLTSKDKLKVKVNTVLGSSAPSLSVKLMQVFSSGS
KDASVLKQELRFDPVEAIHTLDALPEGVDVGEYVFAFEIVFSDPELKRKFATGGRTKVPV
HVTGIIKVGSAKVAVLEGDNVESEKKLDLPGKTDVSLSANHLQKLRLSFVLTTPFGKAFK
PHQAFLKLRHETGAEHIFVVGNSGNQFEITLDFLGLVEKFFYLSGQYAIELTVGDAAMEN
SFLQPLGSIELDMPTAPEKTTQPPALAVSPYLRYGPKAEISHIFRVPEKRPSQEVSFGFL
GLVFVPFLAFLVGLLRLGVNLKNFPTSAVPATFAILFHGGIAAVLLLYVFFWLKLDLFTT
LKTLGLLGIFLMFVGHNTLSHLASTSAKLKAA
NT seq
2079 nt
NT seq
+upstream
nt +downstream
nt
atggcagtaaaattaggatgtatacttatactattactagcagttgcgtcgatctgtgaa
gctgcagcggtatttcacccgatctctgaatctcaccgctccgctgcattggaactgttt
tccgctgatggtggatcgttttcgagcttagaagaagcatatgaagcgttaaggacattc
gaggtccttggaatacataaatctgatctaaaggagcaaacttgtagttctgtggtagat
actctatctacgtcttctgcaaatataaaagacctgtaccatgcattacgagttaatggg
atattacaatgcaaggcaaacaaggcagatataatgggcattgcgtcaagacttaaagtt
gctgtcaaagatgcaacaacgcttctagattattattattcaataggaggcttgctactt
atcaaggatcagagttctgaggtggatatacttctcgaaaacgctgaggggattatacgc
tccataaaggctctcagccaaagtgatggaagatggcgttttagttccaacaatcccgag
tctagtacttatgctgcaggagtagcatttgaaaccatttctggagttgtatcattagca
gcttctgcaatcgatgaaactttgattgggactctgaaaaaagatattgtgaagcttttc
gacagcattgagaaatatggtcagtggacagatgacggggcttattactttgatgacaaa
catattgacgcaagtacacatcaaggcccactttcagccacctctgcagttgttcggggg
ctgacaaccttcgcatctacttctggaagtttaagtatacctgatgacaagattctggga
ttagcaagattttttcttggcattggtactcctggcaatagcaaggacttgtattaccaa
attgattctttatcctgcttagaaaacaatagggtatctgttcctctaattttatcgctt
ccagcttccgtgctttcattgaccagtaaagataaacttaaggttaaggtgaacaccgtg
ctgggatcttctgctccatctttgtcagtaaagctcatgcaagtttttagctctggatca
aaagacgcttcagttcttaagcaggaacttcgtttcgatcccgtagaagctatacatacc
ttggatgctttgccagaaggtgttgatgttggggagtatgtttttgcgtttgagatcgtg
ttttctgatccagaacttaaaagaaaatttgcaaccggaggccgaaccaaagtgccagtc
catgttactggaattattaaagttggtagtgccaaagttgctgtgcttgagggtgataac
gtggagtctgaaaagaagcttgatttacctggaaagacagatgtgtctctatcagcaaac
caccttcagaagttacgcttatcatttgtgttgacaaccccatttggcaaggcgttcaag
ccacatcaggcatttttaaagttgagacatgaaactggagctgaacatatctttgttgtc
ggaaattccgggaaccagtttgagataactctggattttcttggtcttgttgagaagttt
ttctatctttccggtcaatatgccattgagctgacagtgggtgatgccgccatggagaac
tctttcttgcaacctcttggctctatcgagttagatatgcccaccgcacctgaaaagaca
acccaaccccctgcactagctgttagtccttacttaagatacgggcccaaagcagagata
tcacacatcttccgggttcccgaaaaacgtccttctcaagaggtttcctttggcttcttg
ggtctggtttttgttccatttctggcattcttagttgggttgttacgtcttggtgtgaac
ttgaagaacttcccgacatcagccgtgcctgccacatttgccattctcttccatggtggc
attgcagctgttctcttgctctatgtgtttttctggctgaagttggatcttttcaccaca
ttgaaaactttgggacttctggggattttcctgatgtttgttggacataacactctttcc
catcttgcttcgacatcagccaagctaaaagcggcctga
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