Erigeron canadensis (horseweed): 122592413
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Entry
122592413 CDS
T07610
Name
(RefSeq) probable sphingolipid transporter spinster homolog 2 isoform X1
KO
K23677
MFS transporter, Spinster family, sphingosine-1-phosphate transporter
Organism
ecad
Erigeron canadensis (horseweed)
Brite
KEGG Orthology (KO) [BR:
ecad00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ecad02000
]
122592413
Transporters [BR:
ecad02000
]
Major facilitator superfamily (MFS)
Lipid transporters
Sphingosine-1-phosphate transporter (Spinster) family [TC:
2.A.1.49
]
122592413
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Paralog
GFIT
Motif
Pfam:
MFS_1
OATP
MFS_3
Motif
Other DBs
NCBI-GeneID:
122592413
NCBI-ProteinID:
XP_043620564
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Position
3:complement(28180872..28185739)
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AA seq
558 aa
AA seq
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MGVEGQCNKAVEDQEPKPVEEETEQNMAKDSTTTAISLSEPVPSWFTPKRLLVIFCVINM
VNYVDRGAIASNGVNGSPRVCNKSGVCSQGSGIQGDFNLSNFKDGVISSAFMVGLLVASP
IFASLAKSINPFRLIGVGLSVWTFAAAGCGLSIDFWSITVCRMLVGVGEASFISLAAPFI
DDNAPITQRTAWLGIFYMCIPTGVALGYVYGGWVGDGFGWRYAFFGEAILMLPFAILGFV
MKPLQMKGFSPAGSKSSLTTPDTNVVEVEVITTDNDVAISKYSSKEASRFVIEQINLKIC
DFTVISRFSLVIYLYCRSALSRFWQDLKVLLVEKIYVVNVIGYIAYNFVIGAYSYWGPKA
GYSIYHMSNADLLFGGITIVGGIVGTLAGGFILDRMNSTIPNAFKLLSTATFFGAIFCFS
AFCFKNLYAFIVFFLIGEIFVFATQGPVNFVCLHAVKPSLRPLSMAMSTVSIHVFGDVPS
SPLVGVIQDNINNWRTSALILTSILFLASGIWFIGIFLHGVDRYNEDSENPDVNVERLNM
TPLLEDKTAEATSSSTQL
NT seq
1677 nt
NT seq
+upstream
nt +downstream
nt
atgggtgttgaaggacagtgtaacaaagcagttgaagatcaagaaccaaaacctgttgag
gaagaaacagaacaaaatatggctaaagattctactactactgctatttctttatctgaa
cctgttccctcttggtttactcctaaaaggttgcttgtgatattttgtgtgatcaatatg
gtcaattatgtggaccgaggagcgattgcaagcaatggtgtaaatgggagtccccgagtt
tgcaacaaaagtggtgtatgttcgcagggtagtggaattcagggtgatttcaatttaagt
aatttcaaagatggtgttatttcttccgctttcatggttggacttcttgtggcttctccg
atatttgcatcattggccaagagtatcaatccgtttaggctgattggagttggattgtcg
gtttggacttttgcagcagctggctgtggactttcaattgatttttggtccatcaccgta
tgcagaatgctagttggtgttggtgaggcttctttcattagtcttgcggctccatttatt
gacgataatgcccccataactcagagaactgcttggctgggaatattctacatgtgcatt
ccaactggtgttgcccttggttatgtttatggtggatgggttggtgatggttttggttgg
cgctatgcattttttggtgaggcaattctgatgctgccatttgctattttgggttttgta
atgaaacccttgcaaatgaaaggtttctctccggctgggtccaaaagttcattgacgact
cctgacacgaatgtagtagaagtcgaagttattacaaccgataatgatgtcgcaatatca
aagtatagctcaaaggaagcttccaggtttgttatcgaacagataaatctaaaaatctgt
gacttcactgttataagccggttttcattggtaatatatctttattgcagatctgctttg
tctagattttggcaagatttaaaagttcttctggttgagaagatatatgtcgtcaacgtt
ataggttatattgcatacaattttgtcattggtgcatattcatactggggaccaaaggct
ggttatagcatatatcatatgagcaatgctgatctgttatttggaggaataacgattgtg
ggtggaattgtgggaacattagcaggagggtttatcctagatcgaatgaactccacaatc
ccgaatgctttcaagcttctttccactgcaactttctttggtgcaatattttgcttcagt
gcattttgtttcaagaacttgtatgcttttatagttttctttctgatcggggagatattt
gtatttgccactcaggggcctgttaattttgtgtgtctccatgctgtaaaaccaagcttg
agaccattgtctatggctatgtcaaccgtgtctattcatgtctttggtgacgtgccctcc
tctcctcttgttggagttatccaggacaacattaacaattggaggacgtccgctttaatc
ttaacatcaatactctttttggcatctggaatatggtttataggtatatttcttcacggt
gtggacagatacaatgaagatagtgaaaatccagatgtaaatgttgaacgattaaatatg
acaccattgctcgaggacaagacagccgaggcaacctctagttctactcaactgtga
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