Erigeron canadensis (horseweed): 122592415
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Entry
122592415 CDS
T07610
Name
(RefSeq) DNA repair protein recA homolog 1, chloroplastic
KO
K03553
recombination protein RecA
Organism
ecad
Erigeron canadensis (horseweed)
Pathway
ecad03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ecad00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
122592415
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ecad03400
]
122592415
DNA repair and recombination proteins [BR:
ecad03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
122592415
RecFOR pathway proteins
122592415
TLS (translesion DNA synthesis) factors
Other SOS response factors
122592415
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecA
RecA_C
ATPase
Rad51
AAA_25
ATPase_2
AAA_24
AAA_16
AAA
ABC_tran
AAA_35
Motif
Other DBs
NCBI-GeneID:
122592415
NCBI-ProteinID:
XP_043620568
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Position
3:complement(1393666..1400152)
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AA seq
428 aa
AA seq
DB search
MDSMMVFCSKPHYFHHFQINIQKSPLSFFKSKTLVNFNSSKSSLFASKKTTSVVVSNLDS
RVNGALSSDPDSSFLDRQKALEAAMNDINNSFGKGSVTRLGSLGGALVETFPSGCLPLDL
ALGGGLPKGRIVEIYGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVD
VENLIVCQPDNGEMALEIADRMCRSGAVDLICIDSVSALTPRAEIEGEIGMQQMGLQARL
MSQALRKMSGNASKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRPIGK
IKSVKGDEDIGLKVRVRVQKSKVSRPYKQAEFEIIFGEGASKLGCVLDCAEMMDIVLKKG
SWYSYRDQRLGQGRDRALQYLRENLPLCDEIEKLVRSAMMDGTGQAVASYARQSTPLNEE
DELLEELQ
NT seq
1287 nt
NT seq
+upstream
nt +downstream
nt
atggatagtatgatggtgttttgttcaaaaccccattactttcatcatttccaaataaat
attcaaaaatcacctctttctttctttaaatccaaaacccttgttaactttaatagctca
aaatcatctttgtttgcctccaaaaaaacaacaagtgttgttgtttcaaatcttgattcc
agagttaatggtgctctttcatctgacccagattctagttttcttgatagacaaaaagca
ttggaagctgcaatgaatgatattaacaactcatttggtaaaggaagtgtgacaaggctc
ggaagtctcggtggagctcttgttgaaacattcccaagcggttgtctccccttagacctt
gcattaggtggtggcctgcctaaagggagaatcgtagagatttatggaccagaaagtagt
ggaaagaccaccttggcactacatgccattgcagaagttcagaagctaggaggaaatgca
atgcttgttgatgcagagcatgcttttgatccatcatattctaaagcattaggagtggat
gtggagaatttgattgtttgccaacccgataatggagaaatggcacttgagattgcagat
cgtatgtgtagatcaggtgcggttgatctcatctgcattgactctgtctcagctcttacc
ccacgagctgagattgaaggtgaaattggaatgcaacaaatgggtttgcaagcacgtctt
atgagtcaagcattgcgtaagatgtcaggcaatgcatctaaagctggctgtactcttatc
tttctaaatcaaataagatacaagataggagtatattatggaaatccagaagttacaagc
ggaggtattgccttaaaattttttgcatctgttcgacttgaaatacggcctattgggaag
ataaagtcggtcaaaggggacgaggatatcggacttaaagttcgagtaagagttcaaaag
agtaaggtttctagaccatacaaacaagcagagtttgaaatcatatttggagagggagca
agcaaattgggatgtgtattggattgtgctgaaatgatggacattgtgttgaagaagggc
tcttggtatagctatcgagatcaaaggttggggcaaggaagagacagagcattgcaatac
ttgagagaaaaccttcccctttgtgacgaaatagaaaagcttgtcaggtcggcaatgatg
gatggaactgggcaagcagttgcttcttacgctcgacagtcaacaccactaaatgaagag
gatgagttacttgaagaacttcaatga
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