Erigeron canadensis (horseweed): 122592436
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Entry
122592436 CDS
T07610
Name
(RefSeq) katanin p60 ATPase-containing subunit A-like 2 isoform X1
KO
K07767
katanin p60 ATPase-containing subunit A1 [EC:
5.6.1.1
]
Organism
ecad
Erigeron canadensis (horseweed)
Brite
KEGG Orthology (KO) [BR:
ecad00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ecad04812
]
122592436
Enzymes [BR:
ecad01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.1 microtubule-severing ATPase
122592436
Cytoskeleton proteins [BR:
ecad04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Microtubule severing proteins
122592436
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
RuvB_N
AAA_22
TIP49
AAA_16
AAA_5
AAA_14
AAA_24
AAA_2
Mg_chelatase
NPHP3_N
AAA_28
RNA_helicase
IstB_IS21
ABC_tran
ORC-CDC6-like
AAA_33
AAA_7
AAA_18
NACHT
nSTAND3
AAA_17
Parvo_NS1
AAA_25
DUF815
PhoH
bpMoxR
AAA_lid_PRS2_C
TsaE
AAA_3
Motif
Other DBs
NCBI-GeneID:
122592436
NCBI-ProteinID:
XP_043620595
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All DBs
Position
3:44522660..44527390
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AA seq
409 aa
AA seq
DB search
MADEPSITRWSFQDFKMFYDIKFGRKKELISKDSSAAANGVDSQEANGHVSSNGTSSNQN
GIRNNTASELSIYEQYRQAKENSTANGGTLSDAEKPKKSLLPAFESVEMRTLAESLSRDI
IRGSPDVKWESIKGLENAKRLLKEAVVMPIKYPKYFTGLLSPWKGILLFGPPGTGKTMLA
KAVATECNTTFFNISASSIVSKWRGDSEKLVKVLFELARHHAPSTIFLDEIDAIISQRGE
SRSEHESSRRLKTELLIQMDGLTKTDELVFVLAATNLPWELDAAMLRRLEKRILVPLPEP
EARKAMFEELLPSVPEEETLPYDLLVEKTEGYSGSDIRLLCKEAAMQPLRRVMAILEQRD
ILPDDELPKVGPIKHEDIQMAIKNTRPSAHLHAPRYDKFNSDYGSQILQ
NT seq
1230 nt
NT seq
+upstream
nt +downstream
nt
atggctgatgaaccgtcaatcactcgttggtcttttcaggattttaagatgttttatgat
attaagtttgggaggaaaaaggagttgatttcgaaagattcttctgctgctgctaatggt
gtggatagtcaagaggctaatggtcatgtttcaagtaatgggacctcatcaaatcaaaat
gggattcgaaacaataccgcgtctgaattgtccatatacgaacagtatagacaggcaaaa
gagaattcaacagctaatggaggtacattgtcggatgctgagaaaccaaaaaaatctctg
cttcctgcatttgaatcagtagaaatgcgcacattggcagagagtttaagtagggatatt
attcgtggtagtccagatgtgaagtgggagagcataaaggggttagaaaatgcgaaacgc
ctgcttaaagaagcagttgttatgccaataaaataccccaagtacttcactggtcttcta
tccccttggaaaggcattctcttgtttggccctccaggaactggaaagaccatgcttgca
aaggctgttgctaccgagtgtaatactacatttttcaacatttcagcatcatccatcgtc
agtaaatggcgtggtgactcagagaagttagtgaaggtgttatttgagcttgcaagacat
catgcgccatcaactatatttcttgatgaaattgatgcaatcatcagtcaacgaggtgaa
tcacgaagtgaacatgaatcaagtaggcgtcttaaaacagagttactaatccagatggat
ggtttgacaaaaacagatgagctagtctttgtattggcagctacaaacctcccttgggaa
cttgatgctgccatgctcagacgtcttgagaagagaatccttgtaccccttccagaacct
gaagcaaggaaagccatgtttgaggaattattaccttcagtgcctgaagaggagacattg
ccgtatgatttgctggtcgaaaaaactgaaggttattccggctctgatatacggttgtta
tgcaaagaggctgccatgcaacctctgagacgtgtaatggctatcctggaacaacgagac
attttgcctgacgatgagctaccaaaggtggggccgatcaaacatgaagacattcagatg
gcaataaagaacacaagaccatcagcacatctacatgctcctcgttatgataagttcaac
tccgattacggtagtcagatactccaatga
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