Erigeron canadensis (horseweed): 122592473
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Entry
122592473 CDS
T07610
Name
(RefSeq) protein transport protein Sec24-like At3g07100
KO
K14007
protein transport protein SEC24
Organism
ecad
Erigeron canadensis (horseweed)
Pathway
ecad04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
ecad00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
122592473
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ecad04131
]
122592473
Membrane trafficking [BR:
ecad04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
122592473
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec23_trunk
Sec23_BS
Sec23_helical
zf-Sec23_Sec24
Gelsolin
Vps36-NZF-N
HVO_2753_ZBP
TUTase
Sen15
Motif
Other DBs
NCBI-GeneID:
122592473
NCBI-ProteinID:
XP_043620644
LinkDB
All DBs
Position
3:38620757..38628844
Genome browser
AA seq
1030 aa
AA seq
DB search
MGTENPNQANDYPRQAAPFAPPQSSSPFSSSRPVVGMQASAFRPTSVPNPTAVPAPPSAP
PSFPSGPVAGPELPGFRPMQAARPAASYGPPTGGPFQRFPTPSFPSTAQAPPPRTSPVGQ
PVFPPTMRPPPATQGPPMSNFQNRQPQIPPMSIGSPPPSVNTVPSSNNGPQSVDSRYFSS
NSSMQQPQPSIGPPHPAAVRAPSSSAFPGYPAVPVSYQGGYAPPTTSGSFTSHQSAYGPA
PPIASPLGTYVGGSSPPTGMSGLVEDFNSLSIGSAPGSFDAGLDAKALPRPLDGDVEPSS
FAQQYPMNCNSRYLRLTTSAIPSSQSLVSRWHLPLGAVVCPLAESPEGEEVPIVNFATTG
IVRCRRCRTYVNPYVTFTDGGRKWRCNICAMLNDVQADYFAQLDATGKRVDLDQRPELTK
GCVEFVAPAEYMVRPPMPPLYFFLIDVSVYSVKSGMLEVIAHTIKSCLDKLPGSTRTQIG
FITFDSTIHFYNMKSSLTQPQMMVVSDLDDIFIPLPDDLLVNLSESRTVVDAFLDSLPSM
FQDNENVESAFGPALKAAFMVMSQLGGKLLIFQSTLPSLGVGRLRLRGDDIRVYGSDKEN
ALRQAEDAFYKQMAADFTKYQVAVNVYAFSDKYTDIASLGTLAKYTGGQVYYYPSFHSAI
HKEKLRHELARDLTRETAWEAVMRIRCGKGVRFTSYHGNFMLRSTDLLALPAVDCDKAYA
MQFALEETLLTTQIVYFQVALLHTSSSGERRIRVHTAAASVVSDLGEMYRQADTGAIVSL
LGRLAIEKSLNYKLEETRNSLQLRIVKALKEYRNLHAVQHRVGTRMIYPESLKYLCLYGL
ALCKSTALRGGYADSQLDERCAAGFTMMALPVKKMLKLLYPSLLRVDEYLVKSSMQTDDF
EKVCKRLPLATESLDSRGVFVYDDGFRLVVWFGQMLSPDISRNLVGEDLATDFSRASLVE
LDNEMSRKLMQILKKLRGADASYYPLCHLVRQGEQPREGFFLLSNLVEEQVGGMGSYVDW
ILQIHRQVQQ
NT seq
3093 nt
NT seq
+upstream
nt +downstream
nt
atggggactgaaaatcccaatcaagctaatgattatccaaggcaagctgctccctttgcc
cctcctcaaagcagctcacctttttcatcgtctcgtcctgtcgttggaatgcaggcttct
gctttcaggccgacatcagtccctaatccgactgcagttcctgctcccccgagtgcacct
ccatctttcccttctgggcctgtggctggaccagagcttcctggttttagacccatgcaa
gcagctaggcctgctgcttcttatggcccgccaaccggtggacctttccaacgcttccca
acgccgtcgttcccatcaacagctcaagcaccgccaccacgcacttctcctgttggacag
cctgtatttcctccaactatgagacctcctcctgcaactcagggtccacccatgtcaaat
tttcagaaccgacaaccacaaataccaccaatgtctatcggttctccacctccaagcgtg
aacactgtgccttctagcaataacggtcctcagtcagtagattcacgatacttttcttcc
aattcaagtatgcagcaaccacaaccttcgattgggccacctcatcctgctgctgtacgg
gctccttcatcatctgctttccctgggtatccagctgtgcctgtttcttatcaaggaggt
tatgctccaccaaccacatcaggctcctttacctctcatcaaagtgcttatggaccggct
ccacccatagcatctcctttaggaacgtatgttggaggctcctcaccgccaacaggtatg
tcaggattggttgaagacttcaactcactttctatcgggtctgccccaggatcttttgat
gctggccttgatgctaaagcgttgccaagaccactggatggtgatgtagaaccaagctct
tttgctcaacagtatcccatgaattgcaattccagatatttacggcttactactagtgcc
ataccaagctctcagtccctagtttcaaggtggcatttgcctcttggagcagttgtttgt
ccactggcagaatctcctgaaggggaggaagtcccaatagtaaattttgccacaacgggc
attgtgcgttgtagaagatgtcgtacatatgtgaacccatatgtgacttttactgatggt
ggaagaaagtggcgatgcaatatatgtgccatgctcaatgatgtgcaagctgattatttc
gctcagttggatgccactggaaaaagggttgatctagatcaacgtcccgagcttacgaag
ggttgtgtggaatttgttgctccagctgagtacatggtgcggccaccaatgccaccattg
tactttttcctgatcgacgtatcagtatattcggttaaaagcggaatgcttgaggtgatt
gcacatactatcaaatcttgtttggataaattgccaggcagcaccagaacccagattggg
ttcattacttttgacagcacaattcatttttacaatatgaagtcgtctttgacgcagcct
caaatgatggtggtgtctgatttggatgatatatttattcccttgccagatgatctcctt
gtcaacttgtcagaatctagaactgtggtggatgcctttctggatagcttgccttctatg
tttcaagacaatgagaatgtggaatctgcttttgggccagccctcaaagcagcttttatg
gttatgagccaactgggagggaaattgttaattttccaaagtactcttccatcacttggc
gtcggtcggttaaggttgcgaggggatgatattcgtgtatatggttcagataaagaaaat
gctttaaggcaagcagaagacgcgttttataaacagatggctgctgattttacgaagtac
caggttgcagtgaacgtctatgcattcagtgataagtacactgatatagcctcgctaggt
actttggcaaaatacacaggtggtcaagtttattactatccaagctttcattctgccatc
cacaaagagaagttgagacatgagttagctagggacctcactagagaaactgcttgggaa
gctgtgatgcgtatcagatgtggaaaaggggtgcgtttcacttcctatcatgggaatttt
atgttgagatctaccgatctattagcacttccggctgtggactgtgacaaagcttatgca
atgcagtttgcacttgaagagacgttgctcactactcaaattgtgtactttcaagttgct
ttattacacacgtcatcttcgggtgaaagacgaattagagtacacactgctgcagcatca
gtggtttctgatttaggagagatgtaccgccaggcagatactggtgccattgtttctttg
cttggtagattagcgattgaaaaatctctgaactacaaactagaagagactcgtaatagt
cttcaactgagaattgtcaaagcccttaaagaataccgtaatctccacgcggtgcagcac
cgtgtgggaaccagaatgatctacccagaatcattgaaatacctatgcctatatgggttg
gctctttgtaagtcaacagcacttcgtggtggttatgctgattcacagcttgatgagcgc
tgtgcggctggtttcaccatgatggctttgcctgttaagaagatgttaaagcttttgtat
cctagcttgttacgtgtagacgagtaccttgtgaagtcatctatgcagactgatgacttt
gagaaggtttgtaaaaggttgccacttgctacagagagcttagattctagaggggttttc
gtatacgatgatggtttccgtttagtagtgtggttcggacaaatgctttcccctgatata
tccagaaatttagttggggaggatcttgctacagacttttcaagggcaagtcttgttgaa
cttgacaatgaaatgtcaagaaagctgatgcagattctaaagaaacttagaggggctgat
gcatcatattatcctttatgtcatcttgtgaggcaaggtgaacagcctcgggaaggtttc
ttcttactctcgaatctggttgaggaacaggttggtggtatgggtagttacgttgactgg
atacttcaaatacatcgacaagtccagcaatga
DBGET
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