Erigeron canadensis (horseweed): 122592554
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Entry
122592554 CDS
T07610
Name
(RefSeq) vacuolar protein sorting-associated protein 53 A-like
KO
K20299
vacuolar protein sorting-associated protein 53
Organism
ecad
Erigeron canadensis (horseweed)
Brite
KEGG Orthology (KO) [BR:
ecad00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ecad04131
]
122592554
Membrane trafficking [BR:
ecad04131
]
Protein recycling
Others
EARP complex
122592554
Endosome - Golgi transport
Tethering complex
GARP complex
122592554
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps53_N
VPS53_C
COG4_N
RINT1_TIP1
COG7
Vps54_N
XhlA
Motif
Other DBs
NCBI-GeneID:
122592554
NCBI-ProteinID:
XP_043620749
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All DBs
Position
3:complement(41333089..41342837)
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AA seq
819 aa
AA seq
DB search
MEKASTLDYINQMFPTEASLSGVEPLMQKVHNEIRVVDAEILAAVRQQSNSGSKAKEDLA
AATSAVKELMYKVREIKSKAEQSETMVQEICRDIKKLDFAKKHITTTITALHRLTMLVSA
IEQLQGMASKRQYKEASAQLEAVSQLCSHFDGYRDNPKISELRDKFKNIKQILKSHVFSD
FSSLGTGKETEDSNLLQLLSDACLVVDALEPSVREELVKNFCDRELISYQQIFEGAELAK
LDKTERRYAWVKRRLRTNEEIWKIFPTSWHVDYLMCIQFCKLTRTQLEDILENLKEKPDV
GTLLMALQRTIEFEEELADKFGGSGSSRNVTDGLEEIDKAENGNHIVLDIRKKYEKKLAA
HQGNQDDDKELAVPGAGFNFRGIISSCFEPHLMVYVEFEEKTLMDNLEKLVQEETWDMDE
GSQTNILSSSMQVFLIIRRSLKRCSALTKNQTLLNLLKVFQRVLRAYATKLYMKLPKGGT
GIVAAATGMDGQIKTSDKDERMICYIVNTAEYCHKTAEELAENVSKIIDTQLVDAVDMSE
VQDEFSAVITKALVTLVNGLETKFDIEMAAMTRVPWGTLESVGDQSEYVNSIKMILNGSI
PILGSLLSPVYFQFFLDKLASSLGPRFYLNIFKCKQISETGAQQMLLDTQAVKTILLDIP
SLGKQTSGAASYSKFVSREMSKAEALLKVILSPVDSVADTYSALLPEGTPSEFQRILELK
GLKKADQQTILEDFNKRGSGISQIPMATSAVQVIPAAAPAPPPVVNQPSSALLASREDVL
TRAAALGRGAATTGFKRFLALTEAAKDRTDGPFRKLFNP
NT seq
2460 nt
NT seq
+upstream
nt +downstream
nt
atggagaaagcaagtactttggattatatcaatcagatgtttcctacagaagcatcttta
tcgggtgtagagccactgatgcaaaaagtacacaatgagatacgtgttgttgatgctgaa
attctagcagctgttcgtcaacagagtaattcagggtcaaaagcaaaggaggatctggct
gcagctacaagtgctgtgaaggaacttatgtataaagttagagaaattaaaagcaaagcc
gagcaaagcgaaacaatggttcaggaaatatgccgtgacattaaaaagctggattttgca
aagaaacacataacaactacaattacggccctccatcgtcttactatgctagtatctgcc
atcgagcaacttcaaggaatggcttcaaaacgacagtataaagaggcttctgctcagtta
gaggcagtcagccaattatgcagtcattttgatggatacagagataaccccaagattagc
gagctaagagataagttcaagaacatcaaacaaattctcaagtctcatgtgttttctgat
ttctccagcctaggtacgggtaaagagactgaggatagtaatttgctgcaacttctctca
gatgcttgcttagttgttgatgcactagagccatcagtgagggaagagttggtgaagaac
ttttgtgacagagaacttatttcttatcagcagatatttgaaggagctgagctagcaaag
ttggataaaacagagaggagatatgcttgggtcaaacgtcgtttaagaacgaacgaggag
atatggaaaatctttcccacttcatggcatgttgattatctgatgtgcattcagttttgc
aaattgaccaggacacaacttgaagatattcttgaaaacttgaaagagaagccagatgtt
ggaacactcctgatggcattgcaacggacaatagaattcgaggaagagttggcagataaa
tttggtggtagtggtagtagcagaaatgtaacagacggccttgaggaaatagataaggca
gagaatggtaatcatattgtactagacattcgtaagaagtacgagaaaaagcttgctgca
catcaggggaaccaggatgatgataaagagttagctgttcctggagctgggttcaatttc
cgtggaataatatcatcttgcttcgaaccacacttaatggtgtatgtagaattcgaagag
aagacacttatggacaatctggagaagcttgttcaggaagaaacgtgggacatggatgag
ggaagtcagacaaatatattatccagtagcatgcaggtgtttttgattattagaaggagc
ttaaagcgttgctcggcgttgaccaagaaccagactctgctaaatttattgaaggttttt
caaagagttctgagagcttatgctacaaagctttatatgaagttgcctaaaggtggcaca
gggattgttgctgctgcaacagggatggacggacagatcaagacatctgataaagacgaa
agaatgatatgctatattgtgaatactgcagaatattgtcataaaacggctgaagagttg
gccgagaatgtctccaaaataatcgatacacaactggttgatgccgtggacatgtcagaa
gtgcaggatgaattttcagcagtaataaccaaagcattggtaacattagtcaatggcttg
gaaaccaaatttgatattgaaatggctgcaatgacacgtgttccatggggtaccctagaa
agtgtgggcgatcagtcagagtatgtcaatagcataaaaatgatcctcaatggtagcatc
cctatacttggaagccttctttctccagtttattttcagttctttctagacaagcttgca
tcatctctaggtccacgcttttatctcaatatcttcaagtgcaagcagatatcagagact
ggggctcaacaaatgttgctagatactcaggctgtaaagacaatacttttagatattcca
tcccttggaaaacagacatcaggagctgctagttactcaaaatttgtgagtcgtgagatg
agcaaagcagaagcacttctaaaggttatcctgtctccagtggactcggtggcagatacg
tacagtgcactactacctgagggaacaccttcggagtttcagcgaatcctagagctcaag
ggattgaaaaaagcagatcaacaaacgatactagaagattttaacaagcgcgggtctgga
atctcacaaataccgatggctacatcagcagtccaggtgatccctgcagcggcccctgca
cctccccctgtggtgaatcaaccttctagtgcacttcttgcttcaagagaggatgtactc
actagggcagcagcactaggtagaggtgctgctacaactggtttcaaaagattccttgct
ttgactgaagccgcaaaagaccgaacagatggaccttttagaaaactcttcaatccatga
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