KEGG   Erigeron canadensis (horseweed): 122592653
Entry
122592653         CDS       T07610                                 
Name
(RefSeq) RING finger and transmembrane domain-containing protein 2-like isoform X1
  KO
K28516  E3 ubiquitin-protein ligase RNFT2
Organism
ecad  Erigeron canadensis (horseweed)
Brite
KEGG Orthology (KO) [BR:ecad00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:ecad04121]
    122592653
Ubiquitin system [BR:ecad04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    122592653
SSDB
Motif
Pfam: zf-RING_2 zf-C3HC4_3 zf-C3HC4 zf-C3HC4_2 zf-RING_UBOX zf-rbx1 zf-RING_5 Prok-RING_4 zf-C3HC4_4 zf-RING_6 RING_XB3-XBAT31 zf-RING_16 zf-ANAPC11 DUF1451 zf-Nse Caps_synth_CapC zf-RING_10 zinc_ribbon_16 PRC2_EED_ins
Other DBs
NCBI-GeneID: 122592653
NCBI-ProteinID: XP_043620869
LinkDB
Position
3:23130969..23135531
AA seq 483 aa
METSSSLSSSSVTASVRGSSASTSSNSTSSSSSIEDNLYDVFRRNNNNVNNSRFSTSRFF
RSPVSTFLDYIGVLQPATTRSQSSDSLNNGGRIRNDDDSGELSSIRIVGSGEEHNETVRQ
SETLVQSLSRTVSAMALDNQGESRSGLSSIRGSSDTVGSGSVDVEAGAAADGVNNINNNN
NNNSPYQRYDIQQAARWAEQILPFSFLLLVVFIRQHLQGITGFFVTFYIAAFLFKSNDIL
RHQTSLKGERKVSVLVSLSFVFTLHVAWVYWWCQKDEVLNPLVMLPPTTIPPFWHAIFII
MVNDTMARQAAMVLKCFLLMYYKNNRGRNRRKQGQMLTLVEYLFLLYRALLPAPVWYRFF
LNKEYGSLFSSLMTGLYLTFKLTSVVEKVQSFISAINALSRKEIHYGVYATSEQVNAVGD
LCAICQEKMHAPVVLRCKHVFCEECVSEWFERERTCPLCRSLVRPADLRSFGDGSTSLYF
QLF
NT seq 1452 nt   +upstreamnt  +downstreamnt
atggaaacgtcatcatcgttatcgtcgtcatccgttacggcttcggttcgaggttcttcg
gcaagcacaagtagtaattccactagtagtagtagtagtattgaagataatctctatgat
gtttttagaagaaacaataacaacgtcaacaatagccgtttctcgacttctagatttttt
cgatcacctgtgtcgacatttctagactatattggcgtattgcagcctgctacgactcgt
tcccagtcatcagatagtttgaataatggtggaaggatacggaatgatgatgattctggg
gagttgtcctcgattaggattgttggtagtggagaagaacataatgagacggttaggcag
agtgaaacgttggtgcagtcgttatctagaacggtttctgcaatggcgctggataatcaa
ggagagtcgagaagtggtttaagtagtattagaggtagttcggatacggttggtagtggg
agtgttgatgtggaagcgggtgctgctgcagacggtgttaataatatcaataataataat
aataataatagtccttatcagagatatgatatacaacaggccgctcggtgggctgagcag
attcttccgttctcttttttactactggtcgtcttcattcgccaacatttacaagggatt
acaggtttctttgtgacattctatattgctgcttttttgttcaagtccaatgatattctt
cgtcatcagacttctcttaagggagagaggaaggtttcagttcttgtcagtctttctttt
gtgtttacgcttcatgtggcatgggtatattggtggtgtcagaaggatgaagtactgaac
ccattagtcatgctccctcctacaactatacctcctttctggcatgcaattttcataata
atggtgaatgatactatggcaaggcaagcagcaatggtgctcaagtgttttcttttaatg
tattacaagaataacagaggtcgaaatcgtcgaaaacagggtcaaatgctgactttagtg
gagtacttatttctgttataccgtgctttgctgcctgctccagtgtggtatcggttcttt
ttgaacaaagaatatggaagtctattttcgtctttaatgactggattgtatcttacattt
aagctgacttctgttgtcgagaaggtccagtcattcatttctgcaattaatgcattgtca
cgtaaagagattcattatggagtttatgcaacgtctgaacaggtaaatgcagttggtgac
ctttgtgctatatgccaagaaaaaatgcatgctccagtcgtgcttcgttgtaaacacgtc
ttctgtgaagaatgtgtatcagagtggtttgaaagggaaaggacatgcccgttgtgcaga
tcattggtgagacctgcagatctgagatcgtttggtgatggatctactagtctatatttt
cagctgttttga

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