Erigeron canadensis (horseweed): 122592670
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Entry
122592670 CDS
T07610
Name
(RefSeq) protein HEAT STRESS TOLERANT DWD 1
KO
K14848
ribosome assembly protein RRB1
Organism
ecad
Erigeron canadensis (horseweed)
Brite
KEGG Orthology (KO) [BR:
ecad00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ecad03009
]
122592670
Ribosome biogenesis [BR:
ecad03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
122592670
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40
Beta-prop_CAF1B_HIR1
WD40_Prp19
CAF1C_H4-bd
Beta-prop_RIG_2nd
WDR55
Beta-prop_EIPR1
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_WDR19_1st
EIF3I
Beta-prop_EML
ANAPC4_WD40
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
NBCH_WD40
PALB2_WD40
Motif
Other DBs
NCBI-GeneID:
122592670
NCBI-ProteinID:
XP_043620889
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Position
3:36941514..36947022
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AA seq
477 aa
AA seq
DB search
MVRSLKNPKKAKRKNKGSKKGDGSSSSASNAIPSMPAKVWQPGVDSLEEGEELQCDPSAY
NSLHAFHIGWPCLSFDIVRDSLGLVRTEFPHTIYAVTGTQANNAPNSIGIFKISNISGKR
RELVPTKSNNTDTDMDSESSDSDEDDEVENEGPKAPVFQVRKVFHEGCVNRIRAMTQKPH
ICASWGDTGHVQIWDFSSHLNALAASESNVSKDATTVSNQTPLVKFTGHKDEGYAIDWSS
LVPGRLVSGDCKNCIHLWEPASDSTWNVDNKPFVGHTGSVEDLQWSPTEPFVFASSSVDK
TIAIWDTRLGKSPAASIKAHDTDVNVISWNRLASCMLASGSDDGTFSIRDLRLLKEGDSV
VAHFEYHKQPITSIEWSPHEASTLAVSSADNQLTIWDLSLERDEEEEAEFKAKTQEEVHA
PTDLPPQLLFVHQGQKDLKELHWHTQIPGMLISTAADGFNILMPSNIESNLPANAAA
NT seq
1434 nt
NT seq
+upstream
nt +downstream
nt
atggttaggagcttgaaaaacccaaagaaagctaaaagaaagaataagggttcaaagaaa
ggagatgggtcatcatcatcagcatcaaatgctattccatcaatgccagctaaagtatgg
caaccgggtgttgattctttagaagaaggcgaagaattgcagtgtgatccttctgcttat
aattcactccacgcctttcacattggttggccgtgtttaagctttgacattgtccgtgac
tcactgggtctggttcggaccgagtttccacacactatttacgcagtcactggaactcag
gcaaataatgctcccaattcaattggaatatttaaaatatcaaacatatctgggaaacga
cgggaactagtaccaacaaaatcaaataacactgacaccgatatggacagtgagagtagt
gatagtgatgaagatgatgaggtggagaatgagggaccaaaggctccagtcttccaggtg
cgcaaggtgtttcacgaaggttgcgtaaatagaattcgtgctatgacacaaaagccccat
atatgtgcatcttggggagatactggtcatgtgcagatatgggattttagctctcatcta
aatgctttggcagcatctgaaagtaatgttagcaaggatgctaccacagtttctaaccaa
actcctttagttaagtttactggtcacaaggatgaaggctatgcaattgactggagttct
ctcgttcctggcagacttgtatctggggactgcaagaattgcattcacttatgggagcca
gcctctgactcaacatggaatgttgataataaaccatttgttggccatactggaagtgtt
gaagatttgcagtggagccctacagaaccatttgtgtttgcctctagctctgtggataaa
actatagcaatatgggatacccgtttagggaaatcgccagcagcttctatcaaggcacat
gacacagatgtgaacgttatttcatggaacaggctggcaagttgtatgctagcatctggt
agcgatgacgggacattttcaatccgtgaccttagattgctaaaggaaggtgattctgtg
gtggcgcacttcgagtaccacaaacagcctataacatctatcgaatggagcccgcatgaa
gcctctaccctggcagtatcatcagcggataatcaactcacaatatgggacctttctttg
gaacgggacgaggaagaagaggcggaatttaaagccaaaacacaagaggaagtacatgca
cccacagatttgcctccacagcttctttttgttcatcagggccaaaaagacctgaaagaa
cttcattggcatacacagattccaggaatgctcatttccacagcggctgatggtttcaac
atcttaatgccttcaaatatcgaaagcaatcttcctgctaatgctgctgcttaa
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