Erigeron canadensis (horseweed): 122592804
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Entry
122592804 CDS
T07610
Name
(RefSeq) RHOMBOID-like protein 1
KO
K27605
rhomboid-like protein, plant [EC:
3.4.21.105
]
Organism
ecad
Erigeron canadensis (horseweed)
Brite
KEGG Orthology (KO) [BR:
ecad00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ecad01002
]
122592804
Enzymes [BR:
ecad01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.21 Serine endopeptidases
3.4.21.105 rhomboid protease
122592804
Peptidases and inhibitors [BR:
ecad01002
]
Serine peptidases
Family S54: Rhomboid family
122592804
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Gene cluster
GFIT
Motif
Pfam:
Rhomboid
DER1
EMC6_arch
Motif
Other DBs
NCBI-GeneID:
122592804
NCBI-ProteinID:
XP_043621054
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Position
3:complement(36419358..36422523)
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AA seq
392 aa
AA seq
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MSETHRPRADEIQIKVNSRRHNGNTIHPVELESSPLNAGYNHNQTPSPFREIKHFKKWFP
WLIPSFVIADTVLFIITMYVNNCPQNSVSCIANFLGRLSFQPFKENPLLGPSSSTLEKMG
ALDVGKVVDHHQVWRLITCIWLHGGLFHLLANMLSLLVIGIRLEQEFGFIRIGLLYIISG
FGGSLLSALFLQSNISVGASGAVFGLLGAMLSELITNWTIYANKLAALLTLVIIIAINLA
VGILPHVDNFAHLGGFSSGFLLGFVFLMRPQFGWVSQRYSSAHSRPGANPKYKMYQRALW
LLSLILLVAGMITALVSLLRGVNLNDHCSWCHYMSCVPTSRWSCDTTPVSCMSEQTGNQY
TLTCSNSSKNGTYLLTNPNSSQLRGLCTQLCR
NT seq
1179 nt
NT seq
+upstream
nt +downstream
nt
atgtcagaaacccaccggccacgagcggatgagatccaaataaaagtcaactcacggcgg
cacaacggaaacacaattcatccagtagaactcgaatcatcacccttaaacgccggatat
aatcataatcaaacaccgtcgccattccgtgaaataaaacattttaaaaagtggtttcca
tggttaataccgagctttgtaatagcagatactgtattgtttataataactatgtatgtt
aataattgtcctcaaaattcggtatcttgtattgctaatttcttgggccgattatctttt
caacctttcaaagaaaatcctcttcttgggccctcttcttccacgctagagaagatggga
gcgttggacgtgggtaaagtggttgatcatcaccaggtttggcgtctgattacttgcatt
tggttgcatggtggactttttcatttattggcaaatatgctgagtttgttagtcattggc
attcgacttgagcaagaatttgggttcatacgcattgggttgctttatatcatctctggt
tttggtggtagtttattatctgcactcttccttcagtcaaatatatcagtcggtgcttct
ggtgcagtttttgggttgttaggtgcaatgctttctgaactcataactaactggactata
tacgctaataagctggcagcgttattgacccttgtgatcattattgctatcaatctggct
gtggggattctgccacatgtggataattttgctcatcttggtgggttctcttctggtttt
cttcttgggtttgtgttcttgatgcgtccccaatttggatgggttagccaaagatactct
tctgctcattctagacctggagctaaccctaaatacaagatgtatcaacgtgctctttgg
ctcctttcactcattcttttggtggccgggatgattactgctcttgtttcacttttacgt
ggagtcaacttaaatgatcattgttcttggtgtcattacatgagttgtgttcctacatca
aggtggagctgtgacacgacgcctgtgtcctgcatgtctgagcaaactggcaaccagtat
acgctaacatgttctaatagtagtaaaaatggaacctacttgttgacgaacccaaactca
tctcagttacgaggtctttgcactcagctttgtagatga
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