KEGG   Erigeron canadensis (horseweed): 122592814
Entry
122592814         CDS       T07610                                 
Name
(RefSeq) DNA repair protein REV1
  KO
K03515  DNA repair protein REV1 [EC:2.7.7.-]
Organism
ecad  Erigeron canadensis (horseweed)
Pathway
ecad03460  Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:ecad00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03460 Fanconi anemia pathway
    122592814
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ecad03400]
    122592814
DNA repair and recombination proteins [BR:ecad03400]
 Eukaryotic type
  TLS (translesion DNA synthesis) factors
   Y-family DNA polymerases
    122592814
SSDB
Motif
Pfam: IMS IMS_HHH_1 IMS_C BRCT POLH-Rev1_HhH BRCT_2 IMS_HHH PTCB-BRCT UBM LIG3_BRCT HHH_5
Other DBs
NCBI-GeneID: 122592814
NCBI-ProteinID: XP_043621063
LinkDB
Position
3:28790311..28800061
AA seq 1049 aa
MSLDHNTKSGSSSKRSFNSTTNGNNKKNKKSKKEGDGQKTLGMAWGFNSLSNNSRSSFRS
SPFTDMGSYMAVKNRKLHEQFDAEASSSSHGGSGSKKPVFYGVSIFVDGYTIPSSQELRG
FMLKHGGRFENYFSSKRVTHIICSNLPNSKVKNLRSFSRGLPVVKPAWVLDSVAANKLLS
WVPYQLDQVASEANNQPKLSAFLGLRNKLVSGDSVDTNISKVSESAEDVKQPNQESEYFV
RDSCDEAEVEDPTCSNNCEKESAEINEVIADTSAVEMHSKCSLCQPSASEGSRCSDIQNI
KESLSMVPVSSNKGHSASMDPNFVETYFKNSRLHFIGTWRNRYRKRFPTSSDRLRPSSSI
SASSTCQRNTIIHVDMDCFFVSVVIRKRPELWDKPVAVCHSDNPRGTSEISSANYPARDH
GVRAGIFVRDAKALCPQLLIIPYDFNAYEEVADQFYSILHKRCNKVQAMSCDEAILDITE
MEVDDPELLASQIRKEILDTTGCTASAGISDNMLMARLATRSAKPDGQCYLPHEKVNDFL
KQLPIKALPGIGRALEEKLKGKHVKTCEELRMISKESLQKNFGKKTGDMLWNYCRGIDNR
LVGMIQETKSVGADVNWGVRFKDIKDSQVLLSSLCKEVSLRLHGCGVRGRTITLKVKKRK
TDEEPVKYMGCGDCDNLSHSLTVPMATDDVDVLQRITKQLFSHFNVDVQEIRGVGLHVTK
LENSDMNKQGNEMGSIRSWLVSASAIEKGNEDTMEQAAQHLHQSRSNSSMGADMSNPESN
RGVDMPPLSDLDSEVLESLPPDILSEMNDLYGGKLKSFMSKLKSESIGVGTSSLIPENAE
GVRAHPEPGMLDNDGAAPTSQYVGVMPSSLSEVDASVLQQLPEEIRDDILDHLPAHRNQE
APQGLDHLPVQSELMDVSSSNQLWAGNPPQWVEKFKSSDSQILRYFSDIYNGLGSIRDLS
SVLLRSVSTMVICNGGSTLDCDDTIGCLCELLKQYIQLKVESDLEEIHKCYRLLKRLSAK
SKLFLQVYNTSMPHLQMTVSEKYGGNLLI
NT seq 3150 nt   +upstreamnt  +downstreamnt
atgagtttggatcataatacaaaatcaggttccagttcaaaaagaagcttcaattcaaca
acaaatggtaataataaaaaaaataagaaaagtaaaaaagaaggggatggacaaaaaacc
ctaggaatggcttggggttttaattctctatccaataattctcgatcatcttttcgcagt
tcgccctttactgatatgggcagttatatggcagtgaaaaacaggaaactgcatgagcag
tttgacgccgaagcttcaagctcgtctcacggtggttctggttccaaaaaacctgttttt
tatggtgtttctatttttgttgatggatacaccatcccttctagccaggagttacgtggt
ttcatgttaaagcatggaggtcgctttgaaaattacttttcgagcaagcgtgttactcat
ataatatgtagtaatcttcctaacagcaaagtcaagaacttgaggtccttcagtcgtggg
ctcccagtagtgaagcctgcatgggtcttggattctgttgcagctaataagctgttaagc
tgggttccataccaacttgaccaggtagctagtgaagcgaataaccaacccaagttgtca
gcttttctaggtttgagaaacaagttggtatcgggtgactctgtagatactaatatatcc
aaagtaagtgaatcagcagaagatgtgaagcaacctaatcaagaatctgaatattttgtg
cgtgatagctgtgatgaagcagaagttgaggacccaacttgcagtaataattgcgaaaag
gaatctgctgaaataaacgaggtcatagcagatacttctgctgtagaaatgcattccaag
tgtagtctttgtcaaccttctgcatctgaaggcagccgatgttcggatattcaaaatatt
aaggaatcgttatcaatggttccggtttcttctaacaagggccattcagcttcaatggac
ccgaattttgttgagacttacttcaagaactctagactgcatttcataggcacttggagg
aatcggtatcggaaacgctttcccacctcatctgataggttaaggccttcgagctcgatt
agtgcttcatctacatgtcagagaaataccattattcacgtcgacatggattgttttttt
gtgtcggttgtaatcagaaaacgccctgaattgtgggataaaccagttgctgtttgccat
tctgataatcctcgtggtacttctgaaatttcgtcagcaaattaccctgctcgagatcat
ggagtaagagcgggaatctttgttagagatgccaaagcactttgtcctcaacttcttatt
attccttatgactttaatgcttatgaggaggtggctgatcagttttatagcatattacat
aagcgctgcaacaaggtgcaggctatgagttgtgatgaagcaattttagatattacagag
atggaggtggatgatcctgaactcttagcttcacagatacggaaggagatacttgatacc
acaggatgcaccgcaagtgctggaatatctgacaatatgcttatggcccgactagctact
agaagtgccaaaccagacggtcagtgctaccttcctcatgagaaggtgaatgatttttta
aagcaactcccgattaaggcactcccaggtattggccgtgctttagaggagaaattgaaa
gggaaacatgttaaaacttgtgaagagttacgcatgatatcaaaggaatctcttcagaag
aattttggtaagaaaactggtgatatgttatggaattattgtagggggatagataaccgt
cttgttggcatgattcaggaaaccaagtctgtaggtgctgatgtaaattggggagtaagg
ttcaaagacatcaaagatagccaggtgttgctttcgagtctatgcaaggaggtctctttg
cgtctacatggatgtggtgtacgaggacggacaatcacacttaaggttaaaaagagaaag
actgatgaagaaccagtgaagtacatgggctgtggggactgtgacaatctcagtcattca
ttgacggttccgatggctaccgatgatgtggatgttcttcagaggataactaaacagctt
ttcagtcattttaatgtcgatgttcaagagatacgaggagttggcctgcatgtcacaaaa
cttgaaaactcagatatgaataagcaagggaatgagatgggctctatacgctcttggctt
gtatctgcttcagctatagagaaaggaaatgaagatacaatggagcaggctgctcaacac
cttcatcagtcaagaagcaattcatctatgggtgctgatatgtccaatccggaatccaat
cgcggtgttgatatgccacccttgagcgatcttgattcagaagttcttgagagtcttcct
cctgatattctttcagaaatgaatgatttgtatggtgggaaattaaaaagcttcatgtca
aagctcaagtctgaaagtattggcgtcggtacttcatctcttattcctgaaaatgctgaa
ggggttagagcacatcctgaaccaggaatgctggacaatgacggtgccgctccaacttca
caatatgtcggtgtgatgccatcgtctttgagtgaagtagatgcatcagtgttacaacaa
ctccctgaagaaataagggatgacatacttgaccaccttcctgcacataggaaccaagaa
gctcctcaggggttggaccatcttccagttcagtctgaactaatggatgtcagttcaagc
aaccagctttgggctggaaacccaccacagtgggtggagaagttcaaatccagtgattct
caaatattgagatatttttcagatatatataacgggttagggtcaatccgtgatttatct
tcagtgttgctaagaagcgtttccacaatggtgatatgtaatggtggaagtaccttagac
tgtgatgataccattggttgcttgtgtgagcttctgaagcaatacatacaactgaaagta
gaatctgaccttgaagagatacacaagtgttatcgtcttttaaaaaggttgagtgccaag
tctaaacttttcttacaagtctacaacacaagcatgccacaccttcagatgactgtcagc
gagaaatatggtggaaacctcctcatctaa

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