KEGG   Erigeron canadensis (horseweed): 122592989
Entry
122592989         CDS       T07610                                 
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein 1-like
  KO
K12741  heterogeneous nuclear ribonucleoprotein A1/A3
Organism
ecad  Erigeron canadensis (horseweed)
Pathway
ecad03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:ecad00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    122592989
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ecad03019]
    122592989
   03041 Spliceosome [BR:ecad03041]
    122592989
Messenger RNA biogenesis [BR:ecad03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     122592989
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     122592989
Spliceosome [BR:ecad03041]
 Common components
  Common spliceosomal components
   hnRNP proteins
    122592989
SSDB
Motif
Pfam: RRM_1 RRM_7 RRM_PARP14_3 BRAP2
Other DBs
NCBI-GeneID: 122592989
NCBI-ProteinID: XP_043621254
LinkDB
Position
3:complement(31740758..31743646)
AA seq 353 aa
MASKRSDYGDGASPGKIFIGGLAKDTTIDTFVKYFGKYGEITDSVIMKDRATGRPRGFGF
ITYADPSVVDTVIVETHVINGKQVEIKRTIPKGSGESKDFKTKKIFVGGIPTIVTEDEFK
EFFSKFGKVVEHEIIRDHVTKRSRGFGFIVFESDQTVDEILVNGNMIDMNGTQVEIKKAE
PKKSSNQGSHSYNREPKRGYVEINGGFDDSYNSYGPRPGNYGPPPPPYRSYAGGFPSRFA
DYGPYGPGASEYNNRYADYANDYSGYRSGEPSLGGYSSRFSSYNSGGYGTGYTGSALGEF
GRGSGASSYASYAGPGGGAGYEPGAGSGYGAPGGPYGNRAGYSGGSRYHPYSR
NT seq 1062 nt   +upstreamnt  +downstreamnt
atggcttccaagcgatctgactatggcgatggtgccagtcctggcaagattttcattggg
ggtttagcgaaagatacaaccattgatacatttgtgaagtactttggaaagtatggagag
ataactgattcagttataatgaaagatcgggcgactggtagaccaaggggttttgggttt
ataacatatgcagatccttctgttgttgacactgttattgtcgaaacgcatgttattaat
ggcaaacaggttgaaattaagaggactattcccaaaggctctggtgagtccaaagatttt
aaaactaaaaagatatttgttggtggtataccgactatagtcaccgaagatgagttcaaa
gagttcttctcgaagtttggaaaggtagttgagcatgagattatccgagatcatgtgacc
aaacgctctcgagggtttggatttattgtttttgaaagcgatcaaactgttgatgaaatt
cttgtcaatggaaatatgattgatatgaatggtacacaggttgagatcaagaaggctgaa
ccaaagaaatcctcaaaccaaggatctcattcatacaatagggaacctaagcgtggatat
gttgaaattaatggtggatttgatgattcctataacagttatggtcctcgtcccggtaat
tacggacctccccctcctccttataggtcatatgctggaggattcccaagtaggtttgca
gattacgggccatacgggcctggtgccagtgaatataataaccgctatgctgactatgca
aatgattatagtggttataggagcggtgagccatctcttggtggctactctagtcggttt
agttcctacaatagtggagggtatggtacaggatacacagggagtgctctaggtgagttt
ggtcgtggtagtggtgctagtagctatgcaagttatgctgggccaggtggcggtgcaggt
tatgagccaggtgcaggttctggttatggtgcacctggagggccttatggaaatagggca
ggttatagtggcggtagtcgttaccacccttatagcaggtag

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