Erigeron canadensis (horseweed): 122593025
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Entry
122593025 CDS
T07610
Name
(RefSeq) UV-stimulated scaffold protein A homolog isoform X1
KO
K23720
UV-stimulated scaffold protein A
Organism
ecad
Erigeron canadensis (horseweed)
Pathway
ecad03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ecad00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
122593025
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ecad03400
]
122593025
DNA repair and recombination proteins [BR:
ecad03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
Other TCR factor
122593025
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UVSSA_N
DUF2043
VHS
L27
HALZ
Motif
Other DBs
NCBI-GeneID:
122593025
NCBI-ProteinID:
XP_043621297
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All DBs
Position
3:complement(42882090..42884439)
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AA seq
632 aa
AA seq
DB search
MEWEANGKTETVAVVVGLIEKATNSTKPDLDPRVLKSIKSVVRHSDSELRIAVENLMSLM
KRDHSQVRYLTLAIIDELFMRSKLFRTLVVENLDQLLTLSVGFRRNQPLPAPPAIASKLR
SKAIEILERWNTTFGIHYRQLRLGYDYLKNSLRYQFPNLQANAARVQQERRERELRTKEI
LQKKYDLLQSNFSSIKEEVKSIVDEVNECLEILISSKEENLPLDPVDEQDFQEFRSIELR
QIREKSMKEADKLHENSENKVVFDALRELYKLLVTKHLSAVQESISVLVRVELSDNRLRD
SMLKEFIDIRNNLKTIKNKCEEAGCVLSTPADEGEEDFWEEGPSESFNVSKSVVPVKQSE
DHTNKKNDAPECSNSKETNFIMKLNDDLDPLKRKLMTEAPVMKWGSFLDNWGSDRDYMAN
QRGIELEGHWGRVDNDAVIPAKKIAELNVQATIYDEEQKEIQQCRAPLKKGGLCQRQDLK
VCPFHGPIVARDDEGRPLNKNDSTTEDEQQDMNNISTEELLKQAVNNVRERDKEAMKKRE
YDKKELKRAKLAKVRGHNEAVLRDAMIASTSVSSSIGETLSREKDSLAKMLKKKATAKDR
LGKRLLSRKAMAKQVNLGEDHSKYREAFPNQW
NT seq
1899 nt
NT seq
+upstream
nt +downstream
nt
atggaatgggaggcaaacggcaagacagaaacggtggcggtggtggtaggcttaatagag
aaggcaacaaactcaactaaacccgacttggatccgcgagtccttaaatcaatcaaatct
gttgtccgtcactctgattcggagctccggattgccgtcgaaaacctaatgagtctcatg
aaacgagatcactctcaggttcggtatctcacattagccataattgatgaactttttatg
cggtcgaagctttttagaacgctcgtagttgagaatttggaccaattgctgactttgagt
gtcgggtttagaagaaaccaaccgctccctgctcctccagccattgcatccaaattgcgt
tctaaagcgatagaaattttagagaggtggaacactacgtttggaatacattataggcag
ctgagacttgggtatgattacctgaaaaatagccttagatatcagttcccaaatcttcag
gcaaatgcagcaagagttcagcaagaaagaagagaaagagagttacgcactaaagagata
ctgcaaaagaagtatgatttgttacagtcaaacttctcttcgattaaagaggaagtgaag
tcgatagttgatgaagtgaacgaatgcttagaaattcttataagttctaaagaagagaac
ttgccacttgatcctgttgatgaacaagattttcaggaatttcgcagcattgagttgcgt
cagattcgtgagaaatcgatgaaagaagcggacaagttacatgaaaacagtgaaaataaa
gttgttttcgatgctttaagagaactttacaagcttttagtgactaaacatctgtctgca
gtgcaagaatctatttctgttctcgtaagggtggagctgtctgataacagacttagagac
tccatgttaaaggaatttattgacattcgaaataatctcaagacgataaaaaacaagtgt
gaagaagctggctgcgttctttcaacccctgcagatgaaggggaagaagatttttgggaa
gagggcccaagtgaatcatttaatgtttcaaaatctgttgtacctgtcaagcaaagtgaa
gatcacacaaataagaaaaatgacgctccagaatgcagtaatagtaaagaaacaaatttt
atcatgaagttgaatgatgatttggaccctttaaagcgtaagctcatgactgaagctcca
gtgatgaagtggggctcgtttttggacaattggggttcggaccgtgattatatggctaac
cagagagggatagaacttgaaggtcactggggtagggttgacaatgatgcagtcattcca
gctaagaaaattgccgaattaaatgttcaggcaaccatatatgatgaagagcaaaaagaa
attcagcaatgtcgtgcacccttaaaaaaaggcgggctttgtcagagacaggatttgaag
gtgtgcccttttcatggtcccattgttgcacgggatgatgaagggagacctttaaacaaa
aacgatagcactacagaggatgaacagcaggatatgaataatatttctacagaagagtta
cttaaacaggctgtaaacaatgttagagagagagataaagaggctatgaagaaaagagaa
tatgataaaaaggaactgaaacgggctaagcttgcaaaagtccgtgggcacaatgaagct
gtgttacgggatgcaatgattgcttcaacttcagtaagttcttccatcggagaaacctta
agcagagagaaggatagccttgcaaagatgctgaaaaagaaagcaactgcaaaggataga
ttaggtaaaaggctactgagtaggaaggctatggcaaaacaggtaaatcttggagaggat
cattcgaagtatcgagaagcctttcctaatcaatggtag
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