Erigeron canadensis (horseweed): 122593221
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Entry
122593221 CDS
T07610
Name
(RefSeq) long chain acyl-CoA synthetase 8
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
ecad
Erigeron canadensis (horseweed)
Pathway
ecad00061
Fatty acid biosynthesis
ecad00071
Fatty acid degradation
ecad01100
Metabolic pathways
ecad01212
Fatty acid metabolism
ecad04146
Peroxisome
Module
ecad_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
ecad00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
122593221
00071 Fatty acid degradation
122593221
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
122593221
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
ecad01004
]
122593221
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ecad04147
]
122593221
Enzymes [BR:
ecad01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
122593221
Lipid biosynthesis proteins [BR:
ecad01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
122593221
Exosome [BR:
ecad04147
]
Exosomal proteins
Exosomal proteins of breast milk
122593221
Exosomal proteins of breast cancer cells
122593221
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-GeneID:
122593221
NCBI-ProteinID:
XP_043621534
LinkDB
All DBs
Position
3:complement(31729689..31736665)
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AA seq
724 aa
AA seq
DB search
MGDSEGSDIGTPATEQMGFLSNILEDKSYGTAVALIVAIAVPLVLSAMFAGKKKVKQRGV
PVQVGGEPGLAMRNVRSTKLIDVPWEGATTLAALFEQSCKKHSQLRFLGTRKLIDRSFIS
GSDGRKFEKLHLGEYQWESFGQVFERVCSFASGLIQLGHDPDTRIAIFSDTRAEWLIAFE
GCFRQNITVVTIYASLGDDALIHSLNETKVSTLICDSKLLKKVASVSSSLKTVKNVIYFD
NDNVEAVNNIGDWKISSFSEVESMGQKNPVNARLPIKKDVAVIMYTSGSTGLPKGVMMTH
GNIVATAAAVMTVIPNLGPSDVYIAYLPLAHIFELAAETVMLTAGTPIGYSSALTLTDTS
NKIKKGTMGDASMLKPTLMASVPAILDRVRDGVVKKVEEKGGLTTKLFNLAYKRRLMAIE
GSWLGAWGIEKLLWDAMVFKKVRSVLGGEIRFMLCGGAPLAADTQRFINVCIGAPIGQGY
GLTETCAGAAFSEADDDAVGRVGPPLPCVYIKLVSWDEGGYLTSDKPMPRGEVVVGGFSV
TAGYFNNEEKTNEVYKVDENGMRWFYSGDIGRFHPDGCLEIIDRKKDIVKLQHGEYISLG
KVEAALASSKYVENVMLHADPFHTYCVALVVPARQVLEQWAQSAGITYSDFAELCGKKET
VSEVQQSLAKVAKETKLDKFETPAKIKLMPDPWTPESGLVTAALKLKREQLKAKFKDDLE
KLYG
NT seq
2175 nt
NT seq
+upstream
nt +downstream
nt
atgggtgactcggagggaagtgacattggtactcctgcaactgaacagatggggttcttg
tccaatatcctggaagacaaatcttatggtacagcagttgcacttattgttgccattgct
gtaccattggttctttctgcaatgtttgcagggaagaagaaggtaaaacaaagaggtgtt
ccggttcaagttggtggtgagccaggtcttgctatgcgaaatgtcagatcaaccaaatta
attgatgtcccctgggaaggggctacaactttggctgcactttttgagcaatcttgtaag
aagcattcacagctaaggtttcttggcacaagaaagctaatagatagaagctttattagt
ggtagtgatgggaggaagtttgagaagctacaccttggggagtatcagtgggaatcattc
gggcaggtatttgaacgggtttgtagctttgcctccggacttattcagcttggccatgac
cctgatacccgtatagccatcttttctgacacacgtgctgaatggctaattgcatttgag
ggatgctttaggcagaacataacagttgtgaccatatatgcatcattaggtgatgatgct
ctgattcactctctgaatgagacaaaggtatcaaccttgatatgtgattccaagctattg
aaaaaagtggcttcagttagttcgagcttgaaaactgtaaaaaatgtcatttactttgat
aatgataatgttgaagctgtaaataatatcggtgattggaaaatttcttctttttctgaa
gttgagagcatgggacagaaaaatccagttaatgctagacttcctatcaagaaagatgtt
gcagtgatcatgtatacaagtggtagcacaggtttaccaaagggggtgatgatgactcat
gggaatatagtagcaactgcagctgcggttatgactgtgatcccaaatcttgggccaagt
gatgtgtacatagcatacttaccattggcacacatatttgaattggctgcagagactgtg
atgttaactgcaggtactccgattggttatagttcagcactgactttaacagatacctca
aataaaatcaagaaaggaaccatgggagatgcttctatgttaaagccaaccttaatggca
tcggttcctgctattttagaccgtgtccgagatggagtagtaaagaaggttgaggaaaag
ggagggttgactacaaagctttttaacctagcttataaaagacggttgatggcaatagaa
ggaagttggcttggtgcatggggaatagaaaagctgttgtgggatgccatggtttttaaa
aaagtacggtctgtacttggtggagaaattcgttttatgctctgtggtggggctccttta
gctgcagatacccagcgatttattaatgtctgcatcggggctccaattggccaaggctat
gggttgactgaaacatgtgctggtgctgctttttctgaggcggatgatgatgctgttggg
cgtgttggtccacctcttccttgtgtctatatcaagcttgtttcatgggatgaaggggga
tacttgacatctgacaaaccgatgccgcgaggtgaggttgtagttggtggcttcagcgta
actgctggttactttaacaatgaagaaaaaactaatgaggtttacaaggttgatgaaaat
ggtatgcgttggttctactctggagacattggaaggttccaccctgatggatgtcttgaa
atcattgacagaaagaaggatattgtaaagcttcaacatggagagtacatttccttaggg
aaggttgaggcagcgcttgcatcaagcaagtatgtagaaaatgtcatgttacatgctgat
cctttccacacttattgtgttgccttggttgtccctgcccgtcaagttcttgagcagtgg
gcccagagtgcgggtatcacttacagtgactttgctgagttgtgtggtaagaaagaaacc
gtctcggaggttcagcaatctcttgccaaggtagcaaaagaaacgaagttagacaagttt
gagactcctgcaaagattaagctgatgccagatccatggacccctgaatcaggattagta
acagctgcacttaagttaaagagggaacaattgaaagccaaatttaaggatgatctagaa
aagctatacgggtga
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