Erigeron canadensis (horseweed): 122593255
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Entry
122593255 CDS
T07610
Name
(RefSeq) nuclear pore complex protein NUP98A-like
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
ecad
Erigeron canadensis (horseweed)
Pathway
ecad03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
ecad00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
122593255
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ecad03019
]
122593255
03036 Chromosome and associated proteins [BR:
ecad03036
]
122593255
Messenger RNA biogenesis [BR:
ecad03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
122593255
Chromosome and associated proteins [BR:
ecad03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
122593255
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nucleoporin2
Motif
Other DBs
NCBI-GeneID:
122593255
NCBI-ProteinID:
XP_043621575
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All DBs
Position
3:complement(24256765..24260721)
Genome browser
AA seq
721 aa
AA seq
DB search
MATGSTFNSGGFNSTPPNLFSFTSPWANSSNSTTPVQQSLFGVPTTSNSTTPVKPNPFGP
TNLNSTTPVKPNPFGPFGPTNSNSTMPAQPNPFGPTNLNSTTPVKPNPFSLPTPSVATEP
TTFRFPSQAQTSPWNYPGPTSTSFPSQLNTFSSSANTFLTNATPASSNSFSSFAPKTNFT
SPASTGSSFSLASSTPNPFPSFNSLSTQSFASPASSTMSPGQTTATPWNAFWSTPVDKPL
NSLVNTTATSQATSQPPLFNIPNTNPFTSQAINSSSAGSFPSFKAWTSAQANTPAWPSIS
SGPSVSTTTGAANSFSLSNPLSNRNPVTNPFTSQTINSSSSGSFPSFTTWTPAQTSTPSS
SNAFLTTPISTPSFSMTTAAANSVSVQPVIPGPSSDSYQTKALFNPDISSTQSLNGEKTG
ITSMEQPSPAASPFGILPPKPQLYFEDSRPIQIGISSMTVKDKPAAVRYQALTTRHLSRN
KLPIRKYDPKLHTPKIPFFNDTNEIPVAVLVPRENPRKMVISPVSSSPKASTLKNIGEEK
KSSDSLYENEKEDSKASDDPTTEQELFAAILEVPTKLQLPDYYTKPQISDLEAKERAEPG
FCTRVKDFVVGRHGYGSIKFLGDTNVRKLDIENLIQFNNREVIVYMDETKKPAVGEGLNK
AAEVTLLNIKYVDKKTGTQYKDGPKIDKYVEMLKKKAAAQGAEFMSYDPVEGEWKFRVQH
F
NT seq
2166 nt
NT seq
+upstream
nt +downstream
nt
atggccacaggatcaacatttaactcaggcggatttaactcgacgccgccaaatttattt
tcttttacctcaccttgggcgaacagttcaaactctaccacgccagtgcaacagagctta
tttggagtaccaactacttcaaactccaccacaccagtgaaaccaaacccatttggacca
accaatttaaactctaccacaccagtgaaaccaaacccatttggtccatttggaccaacc
aattcaaactctaccatgccagcgcaaccaaacccatttggaccaaccaatctaaactct
accacaccagtgaaaccaaacccatttagtctaccaaccccatcggtcgccacagagcct
accaccttcaggtttcctagccaagcccagactagcccctggaattatcctggccccaca
tctacttcattcccttcacagttaaataccttttcatcttctgcaaacacttttttgacg
aatgctactcctgcttcttcaaattcatttagctcatttgctcctaaaacaaattttacc
agtccagcctctactggatcatctttttcacttgcctcgtcaactcccaatccctttcca
tcttttaattcactgtccactcagagttttgctagtcctgcatcttcaacaatgagcccg
ggtcagaccaccgcaacaccttggaatgctttctggtcaactccagtagacaaacctttg
aattcgctagtcaatacaactgctacctcacaagctacctcacaaccaccattatttaat
atccccaatacaaacccttttacatcacaagccattaattcatcttccgcgggttctttt
ccttcatttaaagcgtggacttccgctcaagctaacacaccggcttggccatctataagt
agtggaccttctgtttccacgacaactggagctgctaactctttctcactttcaaatcca
ctgtcaaatcgtaatcctgttacaaacccttttacatcacaaaccattaattcatcttcc
tcaggttcttttccgtcatttacaacatggactccagctcaaactagcacaccatcttct
tcaaatgctttcttgacaactccaataagcacaccttctttttccatgacaacagcagct
gctaactctgtctcggttcaacctgtgatccctggaccgagttcagattcctatcaaaca
aaggccttgtttaatcctgatatttcttcaactcaaagtcttaatggagaaaaaacagga
attactagcatggaacaaccatcacctgctgcaagtccatttggaatacttccgccaaaa
cctcagttgtattttgaagattctcgaccaattcaaattgggatttccagcatgactgtc
aaggacaagccggctgcagtcagatatcaggcgctgactaccaggcatttgtctagaaac
aagttgccaattcggaagtatgacccaaaactacacactccaaagataccattttttaat
gacaccaatgagatacccgttgctgtattggttccaagagaaaatccaaggaagatggtt
atcagtccggtttcatcgtctccaaaggctagcacgttgaagaacataggtgaagaaaaa
aagtcttcagatagtttgtatgagaatgagaaagaagacagcaaggcctcagatgatcca
actacagaacaagaactatttgcagcaatccttgaagtaccaacaaaacttcaactacct
gactactacacaaaacctcaaatttcagacttggaagcaaaagaaagggccgagcctgga
ttttgtacacgtgtgaaggactttgtggtcggacgccatggctatggtagtataaagttc
ttaggcgacacaaatgtaaggaagcttgatattgagaatcttattcagtttaataaccga
gaggtgattgtgtatatggatgagaccaagaaacctgcggttggtgaagggctcaacaaa
gcagctgaggtaacgcttctcaatatcaaatacgtggataaaaaaactggaacacagtac
aaggatgggccaaagattgataaatatgtagagatgctaaagaagaaggcagctgcacaa
ggtgctgagtttatgtcgtatgatcctgttgaaggtgaatggaaatttcgagtccaacac
ttttga
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