Erigeron canadensis (horseweed): 122593330
Help
Entry
122593330 CDS
T07610
Name
(RefSeq) trafficking protein particle complex II-specific subunit 130 homolog
KO
K20307
trafficking protein particle complex subunit 10
Organism
ecad
Erigeron canadensis (horseweed)
Brite
KEGG Orthology (KO) [BR:
ecad00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ecad04131
]
122593330
Membrane trafficking [BR:
ecad04131
]
Endosome - Golgi transport
Tethering complex
TRAPP complex II
122593330
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRAPPC10_1st
TRAPPC10
Foie-gras_1
TPR_1
Motif
Other DBs
NCBI-GeneID:
122593330
NCBI-ProteinID:
XP_043621659
LinkDB
All DBs
Position
3:33512907..33521230
Genome browser
AA seq
1237 aa
AA seq
DB search
MANSIAQFQLVKDSCDHLLIAVKDVSDLWPLVKEGFEKRLPFKRATLNNKTHDPVSVNNL
PAEFTLTTDSRLRGQDPLSYCFQQPYATVVLVTCEDLDEFKTSLKPRLKLSLQNDDEWFI
VFVSKAAPDDDQATKMATKVYARVEADFNSRRRERCIKFDLLEPDVIVWDELEYKLMECV
RNTLDRRIQFYEEELRKLGEQRLMPVWSFCNLFILKESLAFMFEMAHLYEDALREYVELE
FCYLDAVKHAGKHGDFGGTDHGDDQSAILNPSKKQLAQIVQNSSFREFEFRQYLFACQAK
LLFNLDRPFEVASRGFSFIVSFSEALALHESILPFCFREVWVLTSCLELVKSTAVHYRDG
PVTPEIQKEYYRVQGELYSLSRVKFMRLAYLIGYGSDIERSPVNSALLSMLPWPKPATWP
SIPPDALSEVPLREKTILQATPRIKHFGIRREPLPLEPSFLLHETNRRRPSQSAGNLFEC
VPFIWLTMRYSASSGSEVETFSSPESSPTSMSRTTSIPVNFESSVDTMRLAEAIVAAEHA
LRKTISDPGLWKSLSSLEEFEQKYLELSKGAADNYHLSWWKRHGVVLDGEIAATLLKHGN
YDLAAKLYEKVCALYSGEGWQELLADVLPSLAECQKLLDDHPGYLTSCVRLLSLDKSLFL
TNERQAFQSELVRLAHSEMEDPVPLDVSSLITFAGNYGPPMELCDGDPGTLPVTLWSEFP
DDITLESLSLTLTATNNADARVKAIKSSDATILNTGRNTITLSLPPQKPGAYVLGVLTGQ
IGHLRFRSHGYSRGGPADSDDLMSFDKPTRPILKVLNPRPLVDLTTAVSSALLLNEPQWV
GVVLKPINYALKGAVLHIETGPQLKFEESCSIEMEKYSNGDSDNSSAESKEFAQLTLKNG
SIDLPDWASSIFSVLWIPLRAIKDGLSRGTSAGELSSQRSGIIDGMRTLALKLEFGVSHN
QILKRTMAVHFTDPFNVITRVVKQGSDGALLLQVILHSQVKASLTIHDAWLDLQDGFSHT
AQGDGRPTSNLFPLVVPATSRTGILFDISMGATTTEDQGIMVRPDTVLNVKYDISGDRNI
GSHSPLSLATKVQEDNVTKLLTFTSVLVLKRPVLEPLLVVGFVPLPSNGLRVGQLITMKW
LIERVQYLEEEIMYEVKANSKNWMIAGRKRGHATLSSKQGSKIEISMLCLPLAAGYVRPP
QLDLQNINRANICCNPAAPHLVCVLPPPLSSSFCIPA
NT seq
3714 nt
NT seq
+upstream
nt +downstream
nt
atggcaaattccatagcacagtttcagcttgtaaaagactcatgcgatcacctcctgatt
gccgttaaagatgtgagtgacctgtggcctcttgtcaaggaaggatttgagaaacggctt
ccgtttaaaagagctacattaaacaataaaacccatgatccggtgtccgttaataacttg
ccagctgagtttacattgactacagattcaaggctccgtggtcaggaccctttgtcctat
tgttttcaacaaccatatgcaactgtggttcttgtgacatgcgaggatttagatgagttc
aagacgagcctaaaaccacgtctgaaattgagcttgcaaaatgatgatgagtggttcatt
gtatttgtgtccaaagctgcaccagatgatgaccaagccaccaaaatggcaacaaaagtt
tatgccagagttgaagcggatttcaactctagaagaagggaaagatgcatcaaatttgat
ctccttgaacccgatgtaattgtttgggatgagttggaatacaaactcatggaatgcgtc
agaaacactcttgatagacgcatccagttctacgaggaggagcttcgtaagctcggtgaa
caacgtttaatgccagtttggagcttctgtaatttattcattctcaaggaaagcctagcg
ttcatgtttgagatggctcatctttatgaggatgcattgcgggaatatgttgaactagaa
ttctgttacttggatgcagttaaacatgcaggtaaacatggggactttggaggaacggac
catggagatgatcaatctgccatactaaaccctagtaaaaaacaactggcacagattgtt
caaaatagctcttttagggagttcgaatttcgccaatacttatttgcatgtcaagcaaag
ctattgtttaatctagaccgtccatttgaggttgcatcaagggggttttcattcatagtt
agcttctctgaagcattggccctgcatgagagtattttgcccttttgtttcagggaagtt
tgggtcctaacatcgtgtttggaattggtcaaatcaactgctgtccattacagagatgga
ccagtgacaccggagatacaaaaagagtattatcgtgtacagggggagttatattctctg
tccagagttaagttcatgaggcttgcatatttaattgggtatggatctgatatagaaaga
agtccagtcaacagtgctttacttagtatgctaccatggcccaaaccggcaacctggcct
tcaattccacctgatgcattatccgaggttcccttaagagaaaagacgattcttcaagct
acaccaaggatcaagcacttcggtattcggagagaaccgttgcctcttgaaccctctttt
ctcctgcacgagactaatcgtcgaagaccttctcagtctgccggaaatctgtttgaatgt
gttccattcatttggctaacgatgcgatattctgccagctcaggttcagaagttgagaca
ttttcttctccagaatcatctcctacttctatgtcaaggaccacttctataccggtgaac
tttgagagctcggttgataccatgagacttgctgaagctattgtggctgctgaacatgct
ctccgtaaaactatatctgatcctggtttgtggaaatcattatcatctttggaggagttt
gagcaaaaatatctggaactatcaaagggtgctgctgacaattatcatctttcatggtgg
aaaaggcacggggttgtacttgatggtgaaattgcagccactttacttaagcacggtaat
tatgatctagctgcaaaattatacgagaaagtctgtgctctttactctggtgaaggatgg
caagagttattagcagatgtgcttcctagtctagccgaatgccaaaagttacttgatgat
catcctggttacttaacatcttgtgtgagattgctttctcttgataaaagcttgtttttg
accaatgaacgccaagcttttcagtcagaactagttcgtctggcacacagtgaaatggag
gatcctgtgcccttagacgtctcgtctctaattacttttgctggaaattacgggccaccc
atggagctgtgtgatggggatccgggcacattgcctgtaactttatggagcgaatttcct
gatgacatcactctagaatcacttagtcttaccttgacagctaccaataatgcagatgca
cgtgtaaaggcaatcaagagctctgatgcaacgatactgaacactgggagaaatacaatc
actctttctttgccccctcaaaaacctggtgcgtatgtcttgggtgttcttacagggcag
attggacatttacgatttaggtctcatggttattccagaggcgggcctgctgacagtgat
gatcttatgagttttgataagccaactaggcctatattgaaggtgttaaacccaaggcct
cttgttgatcttacgactgcagtttcatctgcattgctcttgaacgaacctcagtgggtc
ggggttgttctaaagccaatcaattatgccctcaagggtgcagttctgcacatagaaact
ggacctcagttgaagtttgaggagtcgtgttctatagaaatggagaaatattcaaatggt
gatagtgataattcttctgctgaatctaaagagtttgctcaacttactcttaagaacggt
agtatagaccttccagactgggcaagcagtatatttagtgttttgtggattcccttacgc
gccatcaaggatgggctatcaagaggaacatctgcaggggaactgtcttcccaaaggtca
ggcattattgatggaatgaggactttagctctaaaacttgaatttggagtgtcccacaac
cagatactaaaaaggacaatggctgttcatttcactgatccattcaatgttatcacacgt
gtagttaaacagggcagtgacggtgctttgcttttgcaggtgatactacactcacaggtt
aaagcctcattaactattcacgatgcttggttagatctacaagatggtttttctcatact
gcacaaggtgatgggagaccaacatctaacttattcccgcttgtggttccagcaacatct
agaacgggaattttgtttgatatatccatgggagctacaaccactgaagatcaagggata
atggtgcgtcctgatacagtcttaaacgttaaatatgacatttctggcgatagaaatatt
ggatctcatagccctttatccctggcaaccaaagtacaagaggataatgtcacaaagctg
ttgacatttacgagtgttcttgttttaaaacggcctgtattggaacctttgttagtagtc
ggctttgttcctcttccttcaaatggtcttagagttgggcagctaataacaatgaaatgg
ctaatcgaaagggtgcagtatcttgaggaggaaataatgtatgaagtcaaagcgaattca
aagaattggatgattgccgggaggaaacgaggccatgccacgctctccagtaaacaaggt
tcaaagattgagatttcaatgttgtgtctaccactagctgctggatatgttcgtcctcca
caactcgacttgcaaaacatcaaccgggcaaatatttgttgcaatcctgctgctcctcat
ttggtgtgtgtcttgcctccacctctgagttcgtccttttgcatacccgcatga
DBGET
integrated database retrieval system
