Erigeron canadensis (horseweed): 122593374
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Entry
122593374 CDS
T07610
Name
(RefSeq) two-component response regulator ARR12-like
KO
K14491
GARP family transcription factor, ARR-B subfamily
Organism
ecad
Erigeron canadensis (horseweed)
Pathway
ecad04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
ecad00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
122593374
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ecad03000
]
122593374
Transcription factors [BR:
ecad03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters Myb, Myb-like factors
122593374
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Response_reg
Myb_DNA-binding
DNA_pol_phi
Motif
Other DBs
NCBI-GeneID:
122593374
NCBI-ProteinID:
XP_043621705
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Position
3:18747881..18751388
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AA seq
619 aa
AA seq
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MTVEEIKGSVVCNNKVDKFPIGMRVLAVDDNPTCLKVLDGLLRKCQYHVTTTNEAITALK
MLRENRSRFDLIISDVCMPDMDGFKLLELVGLEMDLPVIMLSGNSDPKLVMKGVTHGACD
YLVKPVRLEELRNIWQHVIRRKVETKSKSNKNEGSDQGNEGGDQIVRMNRKRKDEDDDED
DENGDDSDDTSLTQKRPRVVWSIDLHKKFVTAVNQLGIEKAVPKRILDLMNVDGLTRENV
ASHLQKYRLYLRRISHQADMTVAFGESNDASSYVRINSLDGHGDFQTLSNSGRLPSRVYA
PSGMLGRLNSTRGVTLNSLAPPPLVQLNHTQNKLQEFVSLQPPNHQNINLLPGIPPSFDP
NNQQYGNKPNAQLTNFGSIEESHIFSGTKLAAFPSIDQSRILTGSRTFSDPSAVLASQSS
LKLPSTDSESFNLLSSGSCFLDQDCHKSASFSTNQFPIGENYSYTSVVSNITSTATVPLE
ANGGGGFVGDIVLNVNQSLPNQYQKSRDCGNLDYSQYSHDAFSSSPALGLAGVGGGLSGL
MNHSRSDSGTSTLVQIQRPSMQSNEDYLVDQTKLQSGFFASNGYGSLDDIMTRMMKKDQD
PTSIMAGDFGYDHYFESCV
NT seq
1860 nt
NT seq
+upstream
nt +downstream
nt
atgacagttgaagagatcaaaggaagtgttgtatgtaataataaagttgacaagtttcct
attggaatgagagttcttgctgttgatgataatcctacttgtttgaaagtattggatggc
cttcttagaaaatgccaatatcatgttacaaccacaaatgaagcaataacagcactaaag
atgttgagggaaaatagaagcagatttgacttgatcatcagtgatgtttgtatgccagac
atggatggtttcaagcttcttgaactcgttgggctcgaaatggacttacctgtcatcatg
ttatccggaaatagtgacccgaagcttgtaatgaagggggtcactcatggtgcttgtgat
tatcttgtaaagccagttcgccttgaggagctgagaaacatatggcagcatgtaatcagg
cgaaaagttgagacaaagtcaaagtcaaacaaaaatgagggatcagatcaaggaaatgaa
ggtggagatcaaattgtgaggatgaatcgaaaaagaaaagatgaagacgatgatgaggat
gatgaaaatggagatgatagtgacgatacatctttgacacagaaaaggccgcgtgttgtt
tggtctattgaccttcacaagaaattcgtcactgctgttaatcaactgggcattgagaaa
gctgtgcctaaacggattcttgatttgatgaatgtggatggccttactagggaaaatgta
gcaagccatctccagaaatataggctttacttgaggaggataagtcatcaagctgacatg
acggttgcatttggggaaagcaatgatgcatcttcttacgtgagaataaactctcttgat
ggacatggagattttcaaacattatcaaactcaggaagattaccaagtagagtatatgct
ccatctggcatgcttggtagactcaacagtactagaggtgtgacccttaatagcctcgcg
cctccaccattagtccaactaaaccacacccaaaacaaactacaagaatttgtatcttta
cagccaccaaatcaccaaaacatcaatcttttgccgggaattccaccatcttttgatcct
aataatcaacagtatggaaataaacctaatgctcaactcactaattttggttccattgaa
gaatctcatatcttttcaggtaccaagttagctgcttttccttccattgatcaatctcga
atacttacaggttctaggacattctcagatcctagtgcagttcttgcaagtcaatcatct
ttgaagctgccttctacagactcggaatcctttaatcttctttcaagtggttcttgcttt
cttgatcaggattgtcacaaatctgcaagtttttctacgaatcaatttccaattggtgaa
aattatagctatactagtgttgtttctaacatcacctctacagccactgtacctctcgag
gctaatggtggtggtggttttgtcggtgacattgttcttaatgttaatcaatctttgcca
aaccagtaccaaaaaagtcgggattgtggtaacctagattatagccaatactcgcatgat
gcttttagctcatcaccggctttgggtctagctggtgttggtggtggtttaagtggtctt
atgaaccacagtagatcagatagtggtacttcaactcttgtccaaattcagaggccaagt
atgcagtccaatgaagattacttagtggaccagacaaagctacaaagtgggttctttgct
agcaatggttatggttcattggatgatatcatgactcgaatgatgaaaaaggatcaggac
cctacgagcattatggctggagattttggatatgatcattatttcgagtcatgtgtgtga
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