Erigeron canadensis (horseweed): 122593400
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Entry
122593400 CDS
T07610
Name
(RefSeq) nuclear pore complex protein NUP43
KO
K14305
nuclear pore complex protein Nup43
Organism
ecad
Erigeron canadensis (horseweed)
Pathway
ecad03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
ecad00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
122593400
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ecad03019
]
122593400
03036 Chromosome and associated proteins [BR:
ecad03036
]
122593400
Messenger RNA biogenesis [BR:
ecad03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
122593400
Chromosome and associated proteins [BR:
ecad03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
122593400
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WDR55
WD40_Prp19
Beta-prop_THOC3
Beta-prop_EIPR1
Motif
Other DBs
NCBI-GeneID:
122593400
NCBI-ProteinID:
XP_043621740
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All DBs
Position
3:9919126..9922707
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AA seq
356 aa
AA seq
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MSTPPTVTQIHHLPQSTYIDSVRFLPPLSAFDRYIILASFNSDSNQPSIQTHSLNPNPNT
PSPSLSLISSFPLPSRITSLEVSQNTHQNPLIAASTFSGSIHVLFPNPVDAGFESEVSVP
EKVLHNGPVSALDLQENGLGCVSVGEDGRVNLISVGDSGLDYRRVFDSKGLVSYSAVKWG
STVEFATGGFGNSVQWWDQRRPGGPVSQLKSNWTQGATSGIVHSIDIHPSRKHTCLTGGS
YGTVFAWDLRRPQQPIVLSGIDTSETTPCISESDVWEVQYDTFMSASNHANISSERVLPA
MICSEDGILAVIKQGEEPNELLAENCAINSFDIDRQNPSDVICSLEWESIAILTRA
NT seq
1071 nt
NT seq
+upstream
nt +downstream
nt
atgtcaacaccaccaactgtaacacaaatccaccatctcccacaatcaacttacatcgat
tccgtccgtttcctgccaccactttcagcattcgatcgatacatcattctcgcatctttc
aattccgattccaaccaaccttctatccaaacccattccttaaaccctaatccaaacacc
ccctcaccatctctttccttaatttcttcattcccattaccttcaagaatcacttcttta
gaagtttcacaaaatacccaccaaaaccctttaattgctgcttccactttttccgggtcg
attcatgttttgtttcccaacccggttgatgccgggtttgagtcagaggtttcggtcccg
gagaaggtgctgcataatgggccggtttcggctttggatttgcaggagaatggattgggg
tgtgtgagtgttggagaagatgggagggtgaatttgattagtgttggggattcgggtttg
gattatagaagggtttttgatagtaaaggattggtttcatatagtgccgtgaaatggggt
tcgactgttgagtttgctactggtggatttgggaattctgttcagtggtgggatcagagg
agacccggtgggcctgtttcgcaacttaaaagcaactggacccaaggagctacttccggg
attgtgcattctattgatattcatccatcacgaaagcacacatgtctgacaggaggctct
tatggtactgtatttgcatgggatcttcgaaggcctcaacagccgatagttctttcagga
atcgatactagtgagacaacgccttgtatatctgaaagtgatgtgtgggaggttcaatat
gacacttttatgagcgcttcaaatcatgctaatatctcatctgaacgtgtcttacctgcc
atgatatgctctgaagacggtattcttgctgttattaaacaaggtgaagaacctaatgag
ttactggctgaaaactgtgctatcaacagctttgacattgaccgacaaaacccctcagat
gtgatatgcagtttggagtgggagtccattgctatcttgacgagagcatag
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