Erigeron canadensis (horseweed): 122593409
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Entry
122593409 CDS
T07610
Name
(RefSeq) ABC transporter G family member 1-like isoform X1
KO
K05681
ATP-binding cassette, subfamily G (WHITE), member 2
Organism
ecad
Erigeron canadensis (horseweed)
Pathway
ecad02010
ABC transporters
ecad04981
Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:
ecad00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
122593409
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
122593409
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ecad02000
]
122593409
04147 Exosome [BR:
ecad04147
]
122593409
04090 CD molecules [BR:
ecad04090
]
122593409
Transporters [BR:
ecad02000
]
ABC transporters, eukaryotic type
ABCG (White) subfamily
ABCG2, 3 subgroups
122593409
Exosome [BR:
ecad04147
]
Exosomal proteins
Exosomal proteins of breast milk
122593409
CD molecules [BR:
ecad04090
]
Proteins
122593409
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC2_membrane
ABC_tran
ABC2_membrane_7
AAA_21
AAA_29
SMC_N
AAA_22
AAA_23
RsgA_GTPase
AAA_16
Cytidylate_kin
AAA_17
Rad17
nSTAND1
AAA_33
nSTAND3
MMR_HSR1
T2SSE
AAA_28
AAA_18
Dynamin_N
ABC_ATPase
nSTAND_NTPase5
cobW
ATPase_2
NPHP3_N
AAA_14
RNA_helicase
NACHT
Motif
Other DBs
NCBI-GeneID:
122593409
NCBI-ProteinID:
XP_043621752
LinkDB
All DBs
Position
3:complement(27956273..27959457)
Genome browser
AA seq
671 aa
AA seq
DB search
MEHYSGHMDTKIPHEVEIFSHTPKLSHHDQQVKCTSYDNGVNLTWEDLWVTVPDAKNGGN
RSILQGVTGYARPGEILAIMGPSGSGKSTLLDALAGRLDSKTRQSGDILVNGIKKTLAYG
TSAYVTQDDTLMTTLTVRESVYYSAQLQLPDFMSKADKKERAESTIREMGLQDSMDTRIG
GWGAKGLSGGQKRRVSICIEILTRPNLLFLDEPTSGLDSAASYYVMSRIAKLDQHEGRTI
IASIHQPCSEVFELFHNLCLLSSGRTIYFGPTRSANEFFAINGFPCPSFQNPSDHFLRTI
NKDFDEDIEQGYTERKHTEEVIDTLIDSYKSSAIFQEVNNRVSEICKKVSQGDETLEEKK
NHASFSTQSLVLTKRSLINMNRDLGYYWLRLGIYIVLSLGLGTIFYDVGSTYSSIQARSS
MLMFVVSFLTFMTIGGFPSFVEDMKVFERERLNGHYSTGSFVIANTISSTPFLLLVSVIP
GSLAYYLTGLHTGLDHFAYYTSILFSSMLLVESLMMIVANMVPNYLMGIIIGAGIQGFLL
LDGGFFRLPKDLPNPFWKYPLFYVGFHKYAYQGLFKNEFQGANYVYNDAGVQKIMDGAYI
LREQWQVEMGYSKWINLVIILGMVVIYRALFWVIIMIVEKVKSGLLRGLMFSFPKKQKVQ
VMANHLATPSH
NT seq
2016 nt
NT seq
+upstream
nt +downstream
nt
atggaacattattctggtcacatggatacaaagattccccatgaagtggagatcttttct
cataccccaaaattatcacatcatgatcaacaagttaaatgtacgagttatgataatggt
gtgaatttgacatgggaagacctatgggtgacggttcctgatgcgaaaaatggtggaaac
cgatccatacttcaaggcgtcaccggatatgctagacccggtgagatcctagccattatg
ggtccttctggttccggaaaatccaccctacttgatgcacttgcagggagactagactct
aaaactagacagagtggtgacattcttgtaaatggaatcaagaaaaccttggcatatgga
acatcggcttatgtaactcaagacgacacattgatgacaactcttactgtccgtgaaagt
gtctactattccgcacagctccagctacccgacttcatgtcaaaagcagataagaaggaa
agagctgaatcaaccataagagaaatgggccttcaagattccatggacacgagaattgga
ggttggggagctaaaggcctaagtggaggccaaaaaagacgtgttagcatctgcattgag
atcctaacacggcctaaccttcttttccttgacgagccaacaagtggccttgatagtgca
gcttcatactatgtgatgagtagaatcgcaaagcttgatcaacacgaaggacggacgatc
attgcatccattcaccaaccttgtagtgaagtgtttgagctttttcataacctttgcctt
ctttcttctggaagaactatttatttcgggcccacaagatctgcaaatgaattttttgct
ataaatggcttcccttgcccgagtttccagaatccgtctgatcactttcttagaacaata
aacaaggattttgatgaggatatcgaacaagggtacacggaaaggaaacataccgaggaa
gtcattgataccttaatcgattcatacaagtcatcagcaattttccaagaagttaacaac
agagtttctgaaatatgcaaaaaggtatctcagggagatgaaacacttgaagaaaagaaa
aatcatgctagtttctcaactcaaagtcttgtactcacaaaacgctctctaatcaatatg
aatcgagatcttgggtactactggttgcgcctcggtatttatatagtactttccttaggc
cttggaaccatcttctatgatgttggctcaacttacagttctattcaggctagaagttca
atgctgatgtttgtggtgtcattcttaacattcatgaccattggcggatttccctcattt
gtggaagacatgaaggtgttcgaacgtgaaagattaaatggacattactcaactggctca
ttcgttatagccaacacgatatcttcaacaccattcttgttactagtatccgtgattcct
ggatcactagcatattacctcacaggacttcatacaggacttgatcactttgcatactac
acttccatactcttttccagtatgttacttgtcgaaagcctaatgatgatcgtcgccaat
atggttcccaattatttaatgggaatcataatcggcgcagggatccaaggctttctattg
ttagatggtggattctttcgcttaccaaaggatttaccaaatcctttttggaagtacccg
ttgttttacgttggatttcacaagtatgcttatcaaggtttgttcaagaacgagtttcaa
ggagcgaactatgtttataacgacgcaggagtgcaaaaaatcatggatggagcgtatata
ttaagagagcaatggcaagttgaaatgggttactcaaagtggattaatttggtgatcata
ctagggatggtggtaatctatagggctttgttttgggttataattatgattgtggagaaa
gttaagtctggtttattaagaggcttgatgttctcttttccaaagaagcagaaagttcaa
gtgatggcaaatcatctagccacgccttcgcattaa
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