Erigeron canadensis (horseweed): 122593420
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Entry
122593420 CDS
T07610
Name
(RefSeq) choline transporter protein 1
KO
K15377
solute carrier family 44 (choline transporter-like protein), member 2/4/5
Organism
ecad
Erigeron canadensis (horseweed)
Brite
KEGG Orthology (KO) [BR:
ecad00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ecad02000
]
122593420
04147 Exosome [BR:
ecad04147
]
122593420
Transporters [BR:
ecad02000
]
Solute carrier family (SLC)
SLC44: Choline-like transporter
122593420
Exosome [BR:
ecad04147
]
Exosomal proteins
Exosomal proteins of bladder cancer cells
122593420
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Choline_transpo
Plasmod_dom_1
DUF6185
Motif
Other DBs
NCBI-GeneID:
122593420
NCBI-ProteinID:
XP_043621765
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Position
3:complement(33328986..33333499)
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AA seq
697 aa
AA seq
DB search
MRGVIGKYPSSDGNGEVGNGNGGVIKYNRKCRDIVFLVFFIAFWISMIVNSSFGFNQGNP
LRLNFGLDYKGNVCGGKHKDFDLHELELKYYVNPNQVYQSGLKNSGVKLANTRSICLLDC
PIPSEDSLNWVCDYPEGDIRLSLDDWIDMNYDYFADLTPELRNTSLQLQGPCYPVIFPSV
NVYWTCQFIDRPSNVSLTHWKQMNGVNINDDMVIDKSIHNSINTRSSVLKRYVADVGKSW
PVLIVCGGLLPLFLSLLWLLMIRHFVAGMPWVTVFLFNGLIISVTMFYYLKAGWIGNDAI
SPIIGEHDPYYHVSAREQHHIHAAAFLMTCVMIVSVLSSIAIVRRILMATSVLKVAAKVI
GEVHALIIFPIIPYLILAVFYMFWLSAALHLFSSGQVVRNDCSSNCCAYDLKAKRVTCDD
CCGYSVHYTPHIAAGILFHLFGCYWATQFIIACSSTVIAGSVASYYWTRGESSKTIPFLP
VFSSMKLLMRYSLGSVAIGSLIVSFVESTRFILEAIRRRLKVADILPESWIKRMMFYTSR
FCVKAIEVTLKSVNRNAYIMIAITGKGFFRASEMATDLIISNILRIGKVNVIGDVILFLG
KLCVSLASALFAFLMLDTHKYKSSHNKITSPLFPVLFCWGLGYIVATLFFAVVEMSIDTI
ILSYCQDTEEHQGTAHYAPPLLIETFDDQNEVQRIAQ
NT seq
2094 nt
NT seq
+upstream
nt +downstream
nt
atgagaggagtgattggaaagtatccatcaagtgatggaaatggagaagttggtaatgga
aatgggggtgttataaaatacaacagaaaatgtagagatattgtgtttcttgtttttttc
atagctttttggatctccatgattgttaactcaagctttgggtttaaccaaggaaaccca
ttaaggctaaattttggattggattataaaggaaatgtatgtgggggaaagcacaaagat
tttgaccttcatgaacttgaactaaaatattatgttaatcctaaccaagtttaccaaagt
ggattaaagaacagtggagtaaaactggctaacaccagatcaatatgcttgttggattgt
ccaataccatcagaagattctttgaactgggtttgtgattatccagagggagatattcgt
ctttctttagacgattggatcgatatgaattatgattattttgctgaccttactcctgaa
ctacgaaacacatctcttcaacttcaaggcccttgctaccctgtcatttttccaagtgta
aatgtttattggacttgccagtttatcgaccgtccatcgaatgtgtctttaacacattgg
aagcaaatgaatggggttaacatcaatgatgatatggtgatagataagtctattcacaat
tctatcaacacacgatcatctgtgttgaagagatatgtggctgatgtgggaaagtcctgg
ccggtgttgatagtttgtggaggactcctgcctctgtttctatcattgttatggcttttg
atgatccgacattttgtagctggaatgccatgggttaccgtctttctatttaatggtctc
ataatatcagtcacaatgttttactacttgaaagctggatggattggaaatgatgctatc
tcgcccatcattggtgaacatgatccgtactatcatgtttctgcgagggagcaacatcat
atccatgctgctgcttttctcatgacttgtgtgatgattgtctccgttttatcatctata
gctattgttaggcggattcttatggcaacttcagttctgaaggttgcagcaaaggtcatt
ggagaagttcatgctcttataatattcccgatcataccatacctaatccttgcggtcttt
tacatgttttggttatctgctgctcttcatcttttcagttcgggtcaggtagtacgcaac
gattgcagctcaaactgttgtgcatatgatctcaaagccaaacgggttacttgtgatgac
tgttgtggctatagcgtccattacactcctcatatcgcagctggaatcctattccactta
tttggatgctactgggccactcagtttatcatcgcatgttcttcgaccgtgattgctggt
tctgtagcttcgtattattggacgcgtggcgaatcttcgaaaacgattccgtttttgcct
gttttctcatcgatgaagctactcatgcgttatagcctgggctctgtggcaattggttct
ttaattgtatcttttgttgagtcaactcgcttcatacttgaagccatacgccggagatta
aaagttgcggatatcttgcctgaaagctggattaagagaatgatgttctatacttctcgg
ttttgcgtgaaggctattgaagtgaccttaaaatctgtaaaccgcaatgcatacattatg
attgctataacaggaaaagggttctttagagcttctgaaatggcaactgatttgataatc
agtaatattcttcgtattgggaaagtgaatgtgattggggatgttattctgtttcttggg
aagctgtgtgtgagtctggctagtgcactttttgcgtttcttatgttggatactcataag
tacaaatcatcccacaacaagatcacatccccactatttcctgtgctgttctgttggggc
ctgggatatatagtggcaacccttttctttgcagtggtggaaatgtcgatagatactatc
atcctctcgtattgccaggacacagaggaacaccaagggactgcacattatgctcctcca
cttttgatcgagacttttgatgatcagaacgaggtgcaaagaattgcacaatga
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