Erigeron canadensis (horseweed): 122593529
Help
Entry
122593529 CDS
T07610
Name
(RefSeq) E3 ubiquitin-protein ligase SINAT5-like
KO
K04506
E3 ubiquitin-protein ligase SIAH1 [EC:
2.3.2.27
]
Organism
ecad
Erigeron canadensis (horseweed)
Pathway
ecad04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
ecad00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
122593529
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ecad04121
]
122593529
Enzymes [BR:
ecad01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
122593529
Ubiquitin system [BR:
ecad04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
SINA (Seven in absentia) proteins
122593529
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sina_TRAF
Sina_ZnF
Sina_RING
zf-C3HC4_2
DUF7567
DZR
FAIM1
Motif
Other DBs
NCBI-GeneID:
122593529
NCBI-ProteinID:
XP_043621884
LinkDB
All DBs
Position
3:complement(42868765..42872414)
Genome browser
AA seq
337 aa
AA seq
DB search
MEIDNIECVSVSDGLGLDDEIPHHNNNRHHNQNNNNVPQFSSSLKTHHQHNVNVNVVPAT
TINPTTSVHELLECPVCTNSMYPPIHQCHNGHTICSTCKTRVHNRCPTCRQELGDIRCLA
LEKVAESLEFPCKYFSLGCPGIFPYYSKLKHETVCNFRPYNCPYAGSECSVVGDIPFLVS
HLRDDHKVDMHSGYTFNHRYVKSNPREVENATWMLTVFNCFGQYFCLHFEAFQLSMAPVY
MAFLRFMGDENDARNYRYSLEVGGNGRKLTWEGTPRSIRDGHRKVRDSHDGLIIQRNMAL
FFSGGDRKELKLRVTGKIWKETPNADGSNVCIPNLCS
NT seq
1014 nt
NT seq
+upstream
nt +downstream
nt
atggaaattgataacattgaatgcgtttcagtatctgatggattaggattagatgatgaa
atcccacatcataataacaatcgtcatcataatcaaaataataataatgtgcctcagttt
tcatcatctttgaaaacacatcatcaacataatgtaaatgttaatgttgttcctgcaaca
acaatcaatcccacaacaagtgttcatgagcttcttgaatgccctgtttgtactaattct
atgtaccctcctattcatcagtgtcataacggacacacaatttgttccacctgtaagact
cgtgttcacaacaggtgtccaacatgccgacaagagctaggcgatataaggtgtcttgca
ttagaaaaagtggccgaatcacttgaatttccatgcaaatacttctccttgggatgtcct
gggatctttccatactatagcaagttgaaacacgagacagtctgcaattttaggccatac
aactgtccatacgctggatcggagtgctctgttgttggagatatcccttttctagtttct
catttgagggatgatcacaaagtagatatgcactctggatacactttcaaccatcgttat
gtcaagtctaatccacgtgaagttgaaaatgccacatggatgcttacggtcttcaactgc
tttggacagtacttctgtctccactttgaagcgttccagctcagcatggcacctgtttac
atggcgtttctccgattcatgggtgatgaaaatgatgcacgaaactatcgatatagcttg
gaagtcggggggaatggcaggaaactcacatgggaaggcacccctcggagcataagagat
ggtcacagaaaggttagggacagccatgatgggctgattatacaaaggaatatggctctc
tttttctctggaggagataggaaagaactcaagttgagagtcacgggcaagatatggaaa
gaaactcctaatgctgatggtagtaacgtatgcattccaaacctatgtagttaa
DBGET
integrated database retrieval system
