Erigeron canadensis (horseweed): 122593536
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Entry
122593536 CDS
T07610
Name
(RefSeq) adenine DNA glycosylase
KO
K03575
A/G-specific adenine glycosylase [EC:
3.2.2.31
]
Organism
ecad
Erigeron canadensis (horseweed)
Pathway
ecad03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ecad00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
122593536
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ecad03400
]
122593536
Enzymes [BR:
ecad01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.31 adenine glycosylase
122593536
DNA repair and recombination proteins [BR:
ecad03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
122593536
Prokaryotic type
122593536
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
HhH-GPD
NUDIX_4
HHH
EndIII_4Fe-2S
Motif
Other DBs
NCBI-GeneID:
122593536
NCBI-ProteinID:
XP_043621893
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Position
3:complement(20477094..20480009)
Genome browser
AA seq
438 aa
AA seq
DB search
MSKNKKPTPTKSNKRTRQSNSKPDPTGDIEDIIQFKEQEVTEIRESLLKWYDVNKRDLPW
RKPNNNNHMENDYDKKAYGVWVSEIMLQQTRVQTVISYFNRWMDKWPSVLHLSQASIEEV
NEMWAGLGYYRRARFLLEGAKMIVDGGGRFPRSVNELRKVKGIGEYTAGAIASIAFNEAV
PVVDGNVIRVIARLKTISANPKDKMTIKSIWRLAGQLVDNHRPGDFNQALMELGATLCTP
LNPSCSSCPVSAQCSALAESENNPSKLVTDYPTKVAKVKQRQDFSAISVVEIIEGAINTS
ESASKFLLVKRPEEGLLAGLWEFPSVSLDGEADLVARRRAIDDYLKNSFGLKLRKSINIV
AREEVGEYIHIFTHIRLKMYIELLVLRSQDLQKKGKGLMSYKYVDTKTLATLGLSTGVRK
AYDMVQKFKQTRSSLIPS
NT seq
1317 nt
NT seq
+upstream
nt +downstream
nt
atgagcaagaacaagaaacccacacccaccaaatcaaacaaaagaacccgacaatcaaac
tcaaaacccgacccaactggggacatagaagacattattcagttcaaggaacaagaagta
actgaaattagggaatctttgttgaaatggtatgatgttaacaaaagagaccttccatgg
agaaaacccaataataataatcatatggagaatgattatgataaaaaagcatatggggtt
tgggtttcagagataatgcttcaacaaacaagggttcaaactgtaattagttatttcaat
aggtggatggataaatggccatctgttcttcatctttctcaagcttctattgaggaggtt
aatgagatgtgggcaggattaggttattacaggagggcaaggttcttattggagggagca
aaaatgatcgtggatggaggaggaaggtttccgagatcagtgaatgaacttcgtaaggtt
aaaggaataggtgaatacacagctggtgcaattgcctctatagcatttaatgaggcagtg
cctgtggttgatggaaatgttattagggtgattgctagattgaagaccatatctgcaaat
cccaaagacaaaatgactattaagagcatatggagactagctgggcaactagttgacaat
cataggcctggagatttcaatcaggctcttatggaactcggtgctacattatgtactccc
ttaaaccccagttgttcatcctgtccggtgtctgctcaatgtagtgcacttgctgagtct
gaaaataacccatcaaaacttgttactgattatccaactaaagtagcaaaggtgaaacaa
aggcaggatttttctgctattagtgttgttgaaatcatagaaggtgctataaatacatcc
gagtctgcaagtaagtttctgcttgtcaagagacctgaagaaggcttgcttgctgggctt
tgggagtttccatcagtttctttggatggagaagctgatctggttgcaaggagacgagct
attgatgattacttgaagaattcgtttggtttgaaacttaggaagtcgattaatattgtt
gcaagagaagaagtaggtgaatatatccatatattcacccatattcgcctaaagatgtat
atcgagctattggttctacgttcacaagatctgcagaaaaagggcaaaggactcatgtcc
tataaatacgttgataccaaaacccttgcaactctgggactatcaactggagtaagaaag
gcttacgacatggtccagaagtttaaacagactagatcaagtctcatcccaagttaa
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