KEGG   Erigeron canadensis (horseweed): 122593545
Entry
122593545         CDS       T07610                                 
Name
(RefSeq) ras-related protein Rab7-like
  KO
K07897  Ras-related protein Rab-7A
Organism
ecad  Erigeron canadensis (horseweed)
Pathway
ecad04144  Endocytosis
ecad04145  Phagosome
ecad04148  Efferocytosis
Brite
KEGG Orthology (KO) [BR:ecad00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    122593545
   04145 Phagosome
    122593545
   04148 Efferocytosis
    122593545
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:ecad04131]
    122593545
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:ecad04147]
    122593545
   04031 GTP-binding proteins [BR:ecad04031]
    122593545
Membrane trafficking [BR:ecad04131]
 Endosome - Lysosome transport
  Rab GTPases and associated proteins
   Rab GTPases
    122593545
Exosome [BR:ecad04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   122593545
  Exosomal proteins of other body fluids (saliva and urine)
   122593545
  Exosomal proteins of colorectal cancer cells
   122593545
  Exosomal proteins of bladder cancer cells
   122593545
GTP-binding proteins [BR:ecad04031]
 Small (monomeric) G-proteins
  Rab Family
   Rab7/9 [OT]
    122593545
SSDB
Motif
Pfam: Ras Roc Arf GTP_EFTU MMR_HSR1 Gtr1_RagA RsgA_GTPase ATP_bind_1 nSTAND3 AAA_16 Septin PduV-EutP AAA_7 NTPase_1 AAA_24 cobW AAA_22 ATPase_2 MCM NACHT AAA_14 SRPRB AAA_5 ATP-synt_ab NB-ARC
Other DBs
NCBI-GeneID: 122593545
NCBI-ProteinID: XP_043621902
LinkDB
Position
3:complement(29892661..29899105)
AA seq 206 aa
MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ
IWDTAGQERFQSLGVAFYRGADCCVLVYDVNVQKSFDSLNNWREEFLIQASPSDPENFPF
VVLGNKVDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQVIAKNALNTG
DEEEIYLPDTIDVGSNSQQRSSGCEC
NT seq 621 nt   +upstreamnt  +downstreamnt
atgccttcaagaagaagaacacttctcaaagtcatcatcctcggtgacagcggggttgga
aagacatctttgatgaaccaatatgtgaacaagaagtttagtaatcaatacaaggcaact
attggagctgatttcctgacaaaggaagttcagtttgaagacaggctttttactctacag
atctgggatacagcaggacaagaaagatttcagagccttggtgttgccttctaccgtggt
gcagattgttgtgtgcttgtatatgatgtgaacgtgcagaaatcatttgatagcctcaat
aattggagggaggaattccttattcaggcaagtccttcagatccagaaaacttcccattt
gtggttcttgggaacaaggtcgatgtagacggtggcaatagcagagtggtatctgagaaa
aaggcacgagcttggtgtgcctcaaaaggcaacataccatattttgagacctccgcaaag
gaggggatcaatgttgaagaagcttttcaggtcattgcaaagaatgcgttgaacaccgga
gatgaggaagaaatatacctgcctgataccattgatgtcggaagcaacagtcaacaaagg
tcctctggatgtgagtgctag

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