Erigeron canadensis (horseweed): 122593620
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Entry
122593620 CDS
T07610
Name
(RefSeq) RING-H2 finger protein ATL16-like
KO
K19041
E3 ubiquitin-protein ligase RNF38/44 [EC:
2.3.2.27
]
Organism
ecad
Erigeron canadensis (horseweed)
Brite
KEGG Orthology (KO) [BR:
ecad00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ecad04121
]
122593620
Enzymes [BR:
ecad01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
122593620
Ubiquitin system [BR:
ecad04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
122593620
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_2
zf-rbx1
zf-RING_11
zf-C3HC4_2
zf-C3HC4
zf-ANAPC11
zf-RING_UBOX
zf-C3HC4_3
zf-RING_5
Prok-RING_4
zf_RING_Vps8_fungal
zf-RING-like
zf-RING_16
Prok-RING_1
Motif
Other DBs
NCBI-GeneID:
122593620
NCBI-ProteinID:
XP_043621982
LinkDB
All DBs
Position
3:38383036..38383945
Genome browser
AA seq
295 aa
AA seq
DB search
MDFSSMHKQVYNSDHRSVANHQNSTYQPSAFPSTTATGFPLLAIVLACITAITFLIVSYF
LITKCCYPLTQFLMTRPTTSEEPPSVYSTPAWQNTGLDESLIQQIPMCRYSKRDRENKRL
HECVVCLNEFQDLDTLRVLPSCDHGFHMHCIDIWLRDNPNCPICRLNILGTARCPTDTVV
PTSSPQDPPSLAHSSPTSSDQDFVTIELGEDANESRKCCIDSIISNERTSSIKDEQLVIQ
PIRRSFSMDSAVDCDIYLSIQDIIRNHEEASRTKRPFFSFKHTRGSRSAILPLEF
NT seq
888 nt
NT seq
+upstream
nt +downstream
nt
atggactttagttctatgcacaaacaagtttacaattccgaccatcgttcagtcgcaaac
caccaaaactcgacctaccagccatcagcttttccttcaacaactgccactggattccca
ctcctagccatcgtgttagcctgcatcacagccatcacttttttgatcgtcagttacttt
ttgatcactaaatgctgctaccctttaacccaattcttaatgacccgacccactacctca
gaagaacctccatcagtttactcgactccagcatggcagaacactggactcgatgaatca
cttatccaacaaatacccatgtgtcgatatagcaaaagggatcgcgagaacaaaagatta
catgaatgtgttgtttgcttgaatgagttccaagatttagatacgttaagagttcttcct
agttgtgaccatggcttccatatgcactgcattgacatatggctgagggacaacccaaac
tgcccgatttgcagattgaacattttgggtacagccaggtgtccaacagatactgtagtc
ccgacttcttcaccccaagatccgccatctttggcccatagcagcccgacaagcagtgac
caagattttgttacaattgaattgggtgaggatgcaaacgagtcaagaaagtgttgtatt
gattcgataattagcaacgaaaggactagcagcattaaagatgagcagcttgtgatccaa
cccattcgaagatctttctcaatggattctgcagttgattgtgacatttacttatcaatt
caagatatcataagaaaccatgaagaggccagtaggacgaaacgacctttcttttcattt
aaacacacacgaggatcacgaagtgctattctccctctcgagttttga
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