KEGG   Erigeron canadensis (horseweed): 122593628
Entry
122593628         CDS       T07610                                 
Name
(RefSeq) E3 ubiquitin-protein ligase AIRP2-like
  KO
K25840  E3 ubiquitin-protein ligase AIRP2 [EC:2.3.2.27]
Organism
ecad  Erigeron canadensis (horseweed)
Brite
KEGG Orthology (KO) [BR:ecad00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:ecad04121]
    122593628
Enzymes [BR:ecad01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     122593628
Ubiquitin system [BR:ecad04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    122593628
SSDB
Motif
Pfam: zf-C3HC4_3 zf-RING_2 RING_XB3-XBAT31 Prok-RING_4 zf-C3HC4 zf-RING_UBOX zf-C3HC4_2 zf-RING_5 zf-RING_4 zf-C3HC4_4 zf-rbx1 zf-RING_10 zf-UDP zf-ANAPC11
Other DBs
NCBI-GeneID: 122593628
NCBI-ProteinID: XP_043621988
LinkDB
Position
3:complement(21479545..21482745)
AA seq 242 aa
MRKCFKDSLKSLEADIQHANTLASDYPREYDGGCLQMRLSYSPCAHFFLFFVQWSDCHLA
GALGLLRILIYKAYEDGKTSMYIQERKATIREFYGIIFPSLLQLQKGITDIEDKKQKELC
ASKYQRFDEMSKGKLSEIDMEREEECGICLELSTKVVLPDCNHSLCMKCYMNWRTRSQSC
PFCRDNLKRVNSGDLWIYTCRYEVIELSAIARDNLRRLLLYIEKLPLIVVDPVTISYDPR
YR
NT seq 729 nt   +upstreamnt  +downstreamnt
atgagaaagtgtttcaaagattcacttaaatcccttgaagctgatattcaacatgccaat
actttggcatcagattatccaagggaatatgatggtggttgccttcaaatgagattatca
tacagcccatgtgctcacttctttttgttttttgttcaatggagtgattgtcatcttgct
ggtgctcttggtttactcagaattcttatttacaaggcgtatgaagatgggaagacgagc
atgtatattcaagagcggaaagctactataagagaattctatggcattatatttccatct
ttattgcaacttcaaaagggaatcaccgacattgaagataaaaaacagaaggagctctgc
gcatccaagtatcaaagattcgatgaaatgagtaaaggtaaactatccgaaattgatatg
gaacgtgaggaagaatgcgggatttgcttagaattgagcaccaaggttgtcttgcctgat
tgtaaccattccttgtgtatgaagtgctacatgaattggcgtacacgatctcaatcatgt
ccattttgccgtgataatttgaaacgggtaaactcaggtgatctatggatctacacttgt
cgttatgaagtcattgaattatcggctatcgcaagagacaatttgaggagacttcttttg
tacattgagaagctacctcttattgttgtggatcctgtaactatttcttatgaccctcgt
tataggtga

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