KEGG   Erigeron canadensis (horseweed): 122593644
Entry
122593644         CDS       T07610                                 
Name
(RefSeq) UBP1-associated protein 2C
  KO
K12741  heterogeneous nuclear ribonucleoprotein A1/A3
Organism
ecad  Erigeron canadensis (horseweed)
Pathway
ecad03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:ecad00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    122593644
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ecad03019]
    122593644
   03041 Spliceosome [BR:ecad03041]
    122593644
Messenger RNA biogenesis [BR:ecad03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     122593644
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     122593644
Spliceosome [BR:ecad03041]
 Common components
  Common spliceosomal components
   hnRNP proteins
    122593644
SSDB
Motif
Pfam: RRM_1 RRM_7 AbiGi
Other DBs
NCBI-GeneID: 122593644
NCBI-ProteinID: XP_043622008
LinkDB
Position
3:45479504..45484499
AA seq 405 aa
MDPLLKKRKSDDVNGTTDLIQNDVGQSLTTQDARKILESFTKEQLLDVLQTVVVRDVAVL
DSVRSIADFDPAQRKLFIRGIGWETTTEKLKSIFSVFGELEEAIVITDKNTGKSKGYGFV
TFKHVDGAVLALKQPSKKIDGRITVAQLAAARDSLTVDVSMRKIYVGNVPFEISSERLLS
HFSSYGEIEEGPLGFDKQTGKQKGFAFFVYKSEEGARNSLVDPVKNIDGHQVMCKMATDG
KKGKPGGGGVGDATPPIGSMPGSMNSGYGLPGGRSSFSAFSGVPPLPSHQNPHLNASAHS
GIGSGPGYANQGPPAYGTGGYGTGGYGTGAFSGGSHYAGGGAGAPDYPGPNNLGTSMNRL
PPTQGGYGDGGNYGQSSAYPSQPNLPPAGPRGPHGGMYHGGPPYY
NT seq 1218 nt   +upstreamnt  +downstreamnt
atggaccctcttttaaagaaacgtaaatccgacgacgtaaacggcaccaccgatctcatc
caaaacgacgtcggtcaatccctaacgacacaagacgcccgcaaaatcctcgaatccttc
actaaggaacagcttttagacgtcttacaaacagtcgtcgttcgcgacgtcgccgtcttg
gattccgtacgatccatagcagattttgatcccgcacagaggaaacttttcatcagagga
atcggttgggaaaccaccaccgaaaaactgaaatcgattttttcggttttcggagaactc
gaggaagcgatagtgataaccgataagaacacagggaagagtaaagggtatggatttgtg
acatttaaacacgtggacggtgctgttttggcgttgaaacaacctagtaagaaaattgat
ggtcggattacggtggcccagttggctgccgctagggattcgttgactgtggatgtttca
atgaggaagatttacgtagggaatgtgccgtttgagattagttcggaacgattgttgagt
catttttcgagctacggggaaatcgaggaaggaccgttggggttcgataagcagacgggg
aagcaaaaggggtttgctttttttgtttataagagtgaggaaggtgcaaggaattctttg
gttgatcctgttaagaatattgatggtcatcaggttatgtgtaagatggctactgatggg
aagaaggggaagccgggtggcggtggcgttggtgacgctacaccgcccattggctcgatg
cctgggtctatgaattcgggttatggtttgccaggtgggagatcatcgtttagtgcattt
tctggcgtgcctccgttgccttctcatcagaatccgcatctgaatgcttctgcgcattct
ggaattggaagtggtcctgggtatgcaaatcaggggccacctgcttatggtactggtgga
tatggtactggtggatacgggactggagcctttagtggtggctcgcattacgcaggtggt
ggggctggtgctccggattaccccgggccgaataatcttggaacttctatgaacagattg
cctcctactcagggaggatacggtgatggcggaaattatggtcagtcttcagcttaccca
tcacaacctaacctgcctccagctggtccaaggggacctcatggtgggatgtaccatggc
gggccgccatattattga

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