Erigeron canadensis (horseweed): 122593703
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Entry
122593703 CDS
T07610
Name
(RefSeq) translation initiation factor IF-2, chloroplastic
KO
K02519
translation initiation factor IF-2
Organism
ecad
Erigeron canadensis (horseweed)
Brite
KEGG Orthology (KO) [BR:
ecad00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
ecad03012
]
122593703
03029 Mitochondrial biogenesis [BR:
ecad03029
]
122593703
Translation factors [BR:
ecad03012
]
Eukaryotic type
Initiation factors
MTIFs
122593703
Prokaryotic type
122593703
Mitochondrial biogenesis [BR:
ecad03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Mitochondrial translation factors
122593703
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
IF-2
GTP_EFTU_D2
MMR_HSR1
Ras
IF2_N
RsgA_GTPase
MMR_HSR1_Xtn
PduV-EutP
Roc
GTP_EFTU_D4
SpoIIIAH
Motif
Other DBs
NCBI-GeneID:
122593703
NCBI-ProteinID:
XP_043622084
LinkDB
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Position
3:31992623..31998959
Genome browser
AA seq
1015 aa
AA seq
DB search
MASFASLVGLGSTCTCSPGQLEGTRLSIRRVYLPSSSCGFHSLLVGKRWRYISICKYSVT
TDLIADQTTSISLNVANNSSSKDDASDLLLKPTRRPVLKPPENKIEQQQPSSSSSGNSVW
ERSKLGEQEERNKVIESLGEVLEKAEKLETSKNTDIQNRKPSQSPPLRTNTNGTERNGTR
NNSVPAGKAKTLKSVWRKGNPIATVEKVVKEANKVEKVPEEKPRLEVTGKDESEAVASLK
PPQAPQRVQPQLQSRPSATPPAKRPIILKDLGAAPKPVVSDVIENSGTKTKERTGPILID
KFASKRPAVDPMMAQAVLAPPKPGKTPAPGKFREDFRKKGGAAGARRPKVKDDEIHDEET
SELNVSIPGAKKGRKWSKASRKAVRMRLAREAEPVKVELMEVDEEGMLLDELAYNLAVSE
GEILGHLYAKGIKPDGVQKLDKEMVKMICREYDVEVIDVGPAKISEMAKKKEIFDVEDLD
HLQDRPPVLTIMGHVDHGKTTLLDYIRKSKVAASEAGGITQGIGAYKVQVPIDGTVRPCV
FLDTPGHEAFGAMRARGARVTDIAIIVVAADDGIRPQTIEAIAHAKSAGVPIVIAINKID
KEGASDRVMQVMQELSTNGCQPEDWGGDVPMVQISALTGLNVDDLLETTMLVAELQELKA
NPDRNAKGTVIEAGLDKSKGPVATFIVQNGTLKKGDVVVCGEAFGKVRALFDDGGKRVDE
AGPSIPVQVIGLNNVPLAGDEFEVVDSLDIARERAEERAISLRDERILAKAGDGRITLSS
FASAVTTGKNSGLDLHQLNIIMKVDLQGSIEAVKQALQKLPQDNVTLKFILQATGDVSNS
DVDLAVASKAIIFGFNVKAPGSVKSYADNKGVEIRLYKVIYDLLDDMRTAMEGLLDPVED
QVPIGSVDVRAVFSSGSGRIAGCMVTEGKVTKGCGVRVLRKGKPVFVGVIDSLRRIKEDV
KEVNAGLECGIGVDDFNEWEEGDVIEAFNSIQKRRTLEEASSTMTAAFKEAGIEI
NT seq
3048 nt
NT seq
+upstream
nt +downstream
nt
atggcttcttttgcttccttagttggtttaggaagtacttgcacttgctctcctggtcaa
ttagaaggaacccgattatcgattagacgagtttatttgcctagtagttcttgtggtttt
catagtttgttggtggggaaaagatggaggtatatttcaatttgtaaatattctgttact
actgatttaatagctgatcaaacgacttcgatatcgcttaatgtggctaataatagtagt
agcaaggatgatgcttctgatcttttacttaaaccaactagaaggcctgtgttgaaaccg
cccgagaataagatagaacaacaacaaccttctagttctagctcgggtaattctgtttgg
gaaagatcgaaacttggtgaacaagaagagagaaataaggtgattgagtcattaggagag
gtgttggagaaagctgagaaattagagacaagtaagaatacggatatacaaaatagaaaa
ccatcgcagtcacctcctttgagaacaaacactaatggtactgaacggaatggtacgcgt
aataattcagtacctgctgggaaggccaagactcttaagagcgtgtggcggaaggggaac
ccgattgcaaccgtagaaaaagttgtgaaagaagctaacaaagttgagaaggtgccggag
gagaaaccaaggttggaggtaactgggaaggatgagagtgaagcggttgcatcactaaaa
ccacctcaggctcctcaaagagttcaaccacaattacaatcaagaccgtccgcaactcca
cctgcaaaaagaccaataatcttgaaagatttaggagctgctccaaagcctgttgtgtct
gatgttatagaaaattctggtacaaagacaaaagaacgaactggtccgattttgattgac
aagtttgcatctaagaggccggctgttgacccgatgatggctcaagcagttctggcacct
cctaaaccaggaaagacccctgctcctggaaaatttagggaggatttcagaaagaaaggt
ggtgcagcaggggcacgtaggccgaaggttaaagatgatgaaattcatgatgaggagaca
tcagagcttaatgtctcaatccccggggccaaaaagggaagaaagtggagtaaggctagt
aggaaggcggttagaatgcggttggccagggaggctgagccggtcaaggtggagctcatg
gaagttgatgaagaaggtatgttacttgatgaattagcttataatttggctgtgagtgaa
ggtgaaattcttgggcatctttatgcaaagggtattaagcctgatggggtacaaaagttg
gataaggagatggtgaagatgatttgtagggagtatgatgtggaagttattgatgtcggg
ccagctaaaatatcagaaatggcaaaaaagaaggaaatctttgatgtagaggacctagac
catttacaagatcgaccccccgttctcaccattatgggccatgttgatcatggaaaaact
acacttttggattatatccggaaaagcaaggtagcagcctctgaagctggagggatcaca
caaggaattggggcgtacaaggttcaagttcctattgacgggactgtgcgaccatgtgtt
tttcttgacactcccggacatgaggcctttggtgctatgagagctcgtggagccagagta
acagatattgctattattgtagtagctgctgatgatggaatacgtcctcaaacaatcgag
gccatagcccatgccaaatcagctggtgtgccaatagttattgccattaataagatagat
aaggagggagcttcagatcgagtcatgcaagtcatgcaggagctttccacaaatggttgt
caaccagaagattggggtggtgatgtgcctatggtacagataagtgctcttacaggcttg
aatgttgacgatttattggagaccacaatgcttgttgcagagctgcaagagttgaaggct
aatccggacagaaatgcaaagggtacagtcattgaggcaggccttgataaatcaaaagga
ccagtagctacttttatcgtgcagaatggcactcttaaaaaaggggatgtagtagtttgt
ggtgaagcatttggaaaggtaagagctttatttgatgatggtggaaagcgagttgatgaa
gctggtccatcaataccagtacaggtaatcggattaaacaatgtcccattggctggtgac
gaatttgaggtcgttgactctcttgatatcgcacgagagagagcagaggaacgtgcaata
tcattacgggatgaacgaatactggccaaggccggagatggtagaattactctttcgtct
tttgcttctgctgttacaacgggcaagaattctggattagatttgcaccagctgaacatt
attatgaaggtcgatcttcagggatcaattgaagccgtgaaacaagccctacagaagctg
ccacaagataatgtgactttaaaatttattttacaagcaactggtgatgtgagcaacagc
gatgttgatcttgcggtcgctagcaaagccattatttttgggtttaatgtgaaagcaccg
ggttctgttaaaagctatgcagacaataagggcgttgagatacgattgtataaagttata
tatgatcttcttgatgatatgcgaactgcaatggagggactactagaccctgttgaggat
caagtgccaattggttcggtagatgtccgtgcggtgttcagcagtggtagtggacgtatt
gctggatgcatggtgactgagggaaaagtaacaaaaggttgtggagttcgggttctaagg
aaaggcaagccagtttttgttggcgttattgattcgttaagacgcatcaaggaggatgtc
aaagaggtgaatgcaggattagagtgtggaattggagttgatgacttcaatgaatgggag
gaaggtgatgtaattgaagctttcaattctattcaaaaaaggcgaacacttgaagaggca
tcgagtactatgacagcagcatttaaagaagctggaattgagatataa
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