Erigeron canadensis (horseweed): 122593716
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Entry
122593716 CDS
T07610
Name
(RefSeq) autophagy-related protein 11-like isoform X1
KO
K08330
autophagy-related protein 11
Organism
ecad
Erigeron canadensis (horseweed)
Pathway
ecad04136
Autophagy - other
Brite
KEGG Orthology (KO) [BR:
ecad00001
]
09140 Cellular Processes
09141 Transport and catabolism
04136 Autophagy - other
122593716
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ecad04131
]
122593716
03029 Mitochondrial biogenesis [BR:
ecad03029
]
122593716
Membrane trafficking [BR:
ecad04131
]
Autophagy
Cytoplasm to vacuolar targeting (CVT) pathway
Scaffold protein
122593716
Mitophagy
Scaffold proteins
122593716
Mitochondrial biogenesis [BR:
ecad03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
122593716
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ATG17_like
ATG11
ubiquitin
Nucleoprot-TPR
IKKbetaNEMObind
ISPD_C
Tropomyosin
Motif
Other DBs
NCBI-GeneID:
122593716
NCBI-ProteinID:
XP_043622098
LinkDB
All DBs
Position
3:complement(9980451..9986685)
Genome browser
AA seq
1082 aa
AA seq
DB search
MSSSGVSESVIQRGKLLVHVAENGHSYELNCDEDTLVASVQKYLESLSGIHLNDQLLLYL
AMKLEPQQPLSTYKLPLDDKEVFLYNKSKMRNNSTPPQPEEIESPDKIHPDPSRPSSSSN
DPHPLEDAADPALKALASYAIQFRYHYQFGDAICRRTLLKYEICERLLREQKVQEKALEI
ARGNLDHIYKMILHNYTDFVRRYSHQQKSHSNLLVNFWRDLERLRAIKLIPVLQTDSCKC
LSDFVKDENLSKMMEDCNNLHRQFESKVGDFKQEFRELKGSTEQLFSSAASIISSDLEKT
IKEHRHYITEQKSIMQALSKDVSMVKKLVGECLTSQLSNSVRPHDAVSALGPMYDGHDKN
YLPKMQACERAVSNLFLFCKEKKSEMNSFVHGYMQKIAYIQYTIRDVRYKFSVFNEAMIH
QSDQFEHLRVVRGIEPAYRACLAEIVRRKASMKLYMGMAGQLAEKLASKRESEVRKREEF
LKIHSLYIPRDVLALMGLYDTPSTCDVNVAPFDSNLLDLDISDLDRFAPEQYNDSEESID
LEEIAGTNKLEVENAKLKAELASAIARLCFFPLEIESESVNESKMDNTLKEGAEKANEAL
RLKDEYGKQLESILKEKQMQCELYEKRIKELEERLSDQYSKGDSFLTGKIGDSKSEISGY
GEAQGHNGQFSEPMDDASYGYNSLVSKSGFDKFDKNLDDTMSDSSAMVNPNASLDLSMQE
PNQDESHVNENDEKEDPVPDNGIRLVTSSTADNMSEHGKTDGKTDDLVVELQQIIKEKSN
LLMEMETKLQAATEEVIQITRDLETNRNLLDESQMNCAHLENCLREAREEAQTHLCAADR
RASEYNTLRGSTLKLRSFFERLKVCASSDGVTAFADSLQSLAQSLTNCSSANDNADDGTA
EFRECVREFAKKVGLLAKHRAEWIDRYTKAEASAKQLAKELDEKNVLYSALYMKHQSDKQ
ANREKVSFGRLELHEIAAFVLNKAGIYTAINRYCNHYYLSPESAALYVDNIEHRPTYIVG
QIVHIERQTVKPLLPSLVQGGDGSGSSRLGLSPGPSNANPYSLAVGCEFFVVTVAMLPDT
AI
NT seq
3249 nt
NT seq
+upstream
nt +downstream
nt
atgagttcaagtggtgtttcagaaagtgtgatacaaagagggaagcttttggttcatgta
gccgaaaacgggcattcgtatgaactgaattgtgatgaagatactcttgttgcatcggtt
caaaagtatcttgaatcgctttcgggtattcatttaaatgatcagcttcttttgtattta
gccatgaaattagaaccacaacagccactttctacttacaaattgcctttagatgataaa
gaagtgtttttatataataaatcgaaaatgagaaataactcgaccccacctcaacctgaa
gaaatagaatcacctgacaaaatccatcctgacccttcacgaccatcatcatcgtccaac
gatcctcatccattggaggacgctgctgatcctgctttaaaagcgctagcttcatacgcg
atacagtttaggtaccattatcagttcggagatgccatctgtcgacgtacccttttgaaa
tacgagatatgcgagaggcttttaagagagcagaaggtgcaagagaaggcattagagatt
gccaggggtaatttggaccatatctataagatgatccttcataattacacagattttgtt
cggcgctattctcatcagcagaaatcacattctaatcttttagttaatttttggagggat
ttggagagattaagagctattaaacttatacccgtgttacagactgatagttgcaagtgt
ttatcagattttgtgaaggacgaaaatctgagtaaaatgatggaagattgcaacaatttg
cataggcagtttgaaagtaaagttggcgattttaagcaagaatttagagagctaaagggt
agtacagaacaattgttttctagtgcagcttcgattattagtagtgatttggagaaaact
atcaaggagcatcgacactatataactgagcaaaagagtataatgcaagctttgagcaaa
gatgtcagcatggtaaagaaactcgtgggcgaatgtttgacaagtcaactatctaattct
gttcgtccgcatgatgctgtttctgcattaggtcccatgtacgatggtcatgacaaaaat
tatcttcctaaaatgcaagcatgtgagcgtgctgtttcaaacctctttctgttttgcaag
gaaaaaaagtcagaaatgaacagttttgttcatgggtacatgcaaaagattgcatatatt
cagtacacaatcagagatgttaggtacaagttttcggttttcaatgaagcaatgattcat
caaagtgaccaatttgagcacttaagagttgttcgtgggattgagcccgcctatcgagct
tgtcttgctgaaattgtgagaagaaaggcatctatgaaactttatatggggatggcaggc
caattggctgaaaagcttgcatctaaacgggaatctgaagtgagaaaacgagaggagttt
cttaaaatacacagtttatatataccccgagatgttttagcattaatgggattgtatgat
actccaagcacatgtgacgttaatgtagctccatttgatagtaatttacttgatcttgat
atatcagatttggaccggtttgcccctgaacagtataatgactctgaggagtctattgat
ttggaggagattgctgggacaaataagttggaagttgagaacgcaaagttaaaagctgaa
cttgcttctgctatagctcgtctttgctttttcccgttggagattgagtctgaatctgta
aatgagagtaaaatggacaatacactgaaagagggcgctgaaaaggcaaatgaagctctg
cgtttgaaagatgaatatgggaaacagttagaatctattttaaaagaaaaacaaatgcaa
tgcgagttgtatgagaagcggataaaagagctggaggaaaggctatctgatcagtattca
aaaggggattcctttttgactgggaaaataggtgatagcaaatcagagatatcaggctat
ggagaagcacaggggcataatggtcaattttctgagcctatggatgatgcttcatatggt
tataattcattagtttcaaaatcgggttttgataaatttgacaagaatttggatgatacg
atgagtgattcatccgcaatggtaaacccgaacgctagtttggacttatcaatgcaagaa
cccaaccaggatgaatctcatgtgaatgaaaatgacgagaaagaggacccggtgccagat
aatgggatccggttggttactagttccacagctgacaatatgtctgaacatgggaagact
gatgggaagactgatgaccttgtggtggaattgcagcagataatcaaagagaagtcgaat
ctactgatggaaatggaaactaaacttcaggctgcaacagaggaggtcatacagattact
agggatttggaaactaatcggaatcttttagacgagtctcagatgaattgtgctcactta
gagaattgtcttcgcgaagctcgagaagaagctcaaactcatctttgtgcagccgataga
agggcatctgagtataacacattgcggggatcgactttaaaattacggagcttctttgaa
cgacttaaagtttgtgcttcctcagatggtgtcactgctttcgctgactcattgcaatct
ttagctcaatctctaaccaattgcagttctgcaaatgacaatgctgatgatggtactgct
gaatttcgtgaatgtgttcgggagttcgctaaaaaagttgggcttttggctaagcatcgt
gctgagtggatcgacaggtacacaaaagctgaagcttccgccaaacaacttgcaaaggag
ctggatgaaaagaacgtgttatacagcgctttgtacatgaagcatcaatccgacaaacag
gctaacagagagaaggtatcttttggacgtttagaacttcatgaaattgctgcatttgta
ctcaacaaagctggaatatacacagcaattaaccgatactgtaatcattactacctctct
ccagagtcggctgcattgtatgtcgacaacattgaacatcgtcccacttacattgttggc
cagattgtgcacattgagcgacagactgtaaaaccattactaccctctctggttcaaggc
ggggatggaagtggctccagccgattaggcttgagtccaggtcccagtaatgcaaaccca
tacagtttagcagttgggtgtgagtttttcgtggtgacagtagctatgttgccagatacg
gccatttaa
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