Erigeron canadensis (horseweed): 122593754
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Entry
122593754 CDS
T07610
Name
(RefSeq) WD repeat-containing protein 76-like
KO
K24755
WD repeat-containing protein 76
Organism
ecad
Erigeron canadensis (horseweed)
Brite
KEGG Orthology (KO) [BR:
ecad00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ecad04121
]
122593754
03036 Chromosome and associated proteins [BR:
ecad03036
]
122593754
03400 DNA repair and recombination proteins [BR:
ecad03400
]
122593754
Ubiquitin system [BR:
ecad04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
122593754
Chromosome and associated proteins [BR:
ecad03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
122593754
DNA repair and recombination proteins [BR:
ecad03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Other MMR factors
122593754
DSBR (double strand breaks repair)
Other DSBR factors
Others
122593754
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
WD40_CDC20-Fz
WDR55
WD40
Beta-prop_EML_2
Beta-prop_RIG_2nd
WD40_WDHD1_1st
EIF3I
Beta-prop_EIPR1
Beta-prop_TEP1_2nd
Beta-prop_HPS5
Beta-prop_CAF1B_HIR1
WD40_RFWD3
Beta-prop_IFT140_1st
WD40_MABP1-WDR62_2nd
Beta-prop_WDR75_1st
Beta-prop_WDR11_2nd
Beta-prop_TEP1_C
CyRPA
Motif
Other DBs
NCBI-GeneID:
122593754
NCBI-ProteinID:
XP_043622135
LinkDB
All DBs
Position
3:complement(18604940..18610333)
Genome browser
AA seq
470 aa
AA seq
DB search
MKKATEYEQKRLENIKRNEQLLASLNIKSKLSDLSASKRQRAETKSYKVSPAKKVKSETP
IVIRRSLRTQGKAPDLAGLKDDFSETPKKLSNLKSHVIPNKSPRELIPISMRDAKTSSES
DEALVSKISSVCKESRLKDGDCGKKYRVTASVDLDSMKLAPENVARVVPNRILSVKLFPS
TYMNIVVVGNKFGDVGFWNVDSEDKDGDGIYMYHPHPAPVSAIVIQPFSLNKIITSCYDG
QVRSLDIEKEMFDLAYSSEHAIFSMFQRLDDVNSLFFGEGHGVVRCWDERSGKTSFSWEL
HETRINTIDFNPENVNMMATSSTDRTVCIWDLRKLGKSKPNSLKMVTCERAVQSAYFSPS
GSHLATTSLDDKIGVLSGANYDDEFMINHNNQTGRWLSTFKGVWGWDDSHIYVGNMRRGV
DIISAEERRLVTTLDSPHMTAIPCRFDAHPLKPGMLAGATSGGQVYIWST
NT seq
1413 nt
NT seq
+upstream
nt +downstream
nt
atgaagaaagcaacggaatacgaacagaaacgactcgaaaacatcaaacgcaatgagcaa
ctgctcgcttctctcaacatcaaatccaaactttccgatctttccgcctccaagcgccaa
agggcagagacaaaatcatacaaagttagtccagcgaagaaagtgaaatctgaaacccca
attgtaattcgtagatctttaagaactcaaggaaaagctcctgatttggcaggtttaaaa
gatgatttttctgaaacacctaagaaattatcaaacctaaaatcacacgttatccctaac
aagtctccacgagagttgattccaattagtatgagagatgccaaaactagctctgaatca
gacgaggcacttgtcagtaagatttcgagtgtttgtaaggagtctagattgaaagatggt
gattgtgggaagaagtatagggtcacggcttcggttgatttggattcgatgaagttggca
ccggagaatgttgctcgtgttgtgccaaataggatattgagtgttaagctcttcccatcg
acttatatgaatattgttgttgttgggaataaatttggagatgtagggttttggaacgtg
gattcagaagataaagatggtgatgggatttacatgtatcatcctcatccggcacctgtt
tcagcaatagttattcaaccattttcattgaacaagataattacaagctgttacgatggt
caagttcgctcattagatattgaaaaggagatgtttgatttggcatactccagtgaacat
gcaatattttctatgtttcaacgacttgacgatgttaactctttgttttttggtgagggt
catggagtagttcgttgctgggatgagaggtccgggaagacatcattttcatgggagctg
catgagactaggattaatacaatagattttaatccagaaaatgttaatatgatggctaca
agttcaacagatagaactgtgtgcatttgggatttaagaaaacttggtaagagcaagccc
aactctcttaagatggttacctgtgagagggctgtacagtctgcctacttctctccttct
ggaagccatcttgctacaacaagtcttgatgacaagattggagtgctaagtggggccaat
tatgatgatgaattcatgataaaccacaacaatcagacaggcagatggctttctacattc
aaaggtgtatgggggtgggatgactcacatatatatgtgggaaacatgagaagaggagtt
gatattatttctgcagaagagaggagacttgttactactcttgatagccctcatatgact
gcaatcccatgtcgttttgatgctcatccattgaagcctgggatgcttgcaggggcgaca
agtggaggccaggtttatatctggagcacatag
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