Erigeron canadensis (horseweed): 122593787
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Entry
122593787 CDS
T07610
Name
(RefSeq) protein ELC-like
KO
K12183
ESCRT-I complex subunit TSG101
Organism
ecad
Erigeron canadensis (horseweed)
Pathway
ecad03250
Viral life cycle - HIV-1
ecad04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
ecad00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
122593787
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
122593787
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ecad04131
]
122593787
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ecad04147
]
122593787
Membrane trafficking [BR:
ecad04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT-I complex
122593787
Exosome [BR:
ecad04147
]
Exosomal proteins
Proteins found in most exosomes
122593787
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UEV
Vps23_core
Spc7
Motif
Other DBs
NCBI-GeneID:
122593787
NCBI-ProteinID:
XP_043622171
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All DBs
Position
3:40314399..40315929
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AA seq
372 aa
AA seq
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MVHPQPPSPPTVQFLNSVLSQSSPLALPYAEDNKWLIRQHLVTLTESSPSLDLKIATFTH
NDGRSVNLLQLDGTVPMVFKNVTYNIPVIIWLMESYPRDAPLVFVNPTRDMVIERQHSFV
NPCGLVSIDYLLNWVYLSSNLVDLVHRLSHFFAIDPPLYSQCRPSVSLTPSLNPELSSSL
AESVRPRTEDPGEVYRWNVIDKLVVDVFRDVEELRKKSEVEMEGMFKAQSVLRQRGEEIT
KGLREMHHEKEALEQQLQMVLMNIDVFEECVKVNKEELLNVVDVDEAFEPVDVLSKQMLE
CTAADLAIEDVVYAIDKVVQQGVIAFDVYLKRVRSLSREQFFHRATAAKVRDVQMQAQVT
SMASRASASYVV
NT seq
1119 nt
NT seq
+upstream
nt +downstream
nt
atggtccacccacaaccaccgtcaccacccaccgtacaattcttaaattccgtcttatca
cagtctagtcccttggctctcccttacgccgaagacaataaatggctaatccgtcaacac
ctcgttactctaacggaatcttccccttcacttgaccttaaaatcgctactttcactcat
aacgacggccgttccgttaaccttcttcaacttgacggaactgtccctatggtttttaaa
aacgttacttataacatccctgttattatctggcttatggaatcctaccctcgtgacgcc
cctcttgtcttcgtgaatcccacgcgcgatatggttattgaaaggcaacattcttttgtt
aatccttgtggtttggtttctattgattatttgcttaattgggtttatcttagctctaat
cttgttgatttagttcatcgtttgtctcattttttcgctatcgatcccccgttatattca
caatgtagacctagtgtaagtctaacccctagtttaaaccctgaacttagttctagtctg
gccgagtcggtacggcctcggacggaggacccgggggaggtttataggtggaatgtgata
gataagctggtggtggatgtatttagggatgtggaggaattgaggaagaaaagtgaggtt
gaaatggaaggaatgtttaaggcgcaatcggtgttaaggcaacgaggagaggagataacg
aaagggttgagagagatgcatcacgaaaaagaggccttggagcagcagttacagatggtt
ttgatgaatattgatgtgtttgaagaatgtgtgaaagtgaacaaagaggagttgttgaat
gttgttgatgtggacgaggcgtttgagccggtggatgtgctgtccaaacagatgttggag
tgtacggccgctgatctggctattgaagacgtggtttatgcgattgataaagttgttcaa
caaggggtgatagcttttgatgtttatttgaaacgggtgaggtcattgtcgcgtgaacag
ttttttcatcgggcgactgctgctaaggttcgggatgttcagatgcaagctcaagttact
agtatggcctccagggcatcggcttcgtatgtcgtttga
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