Erigeron canadensis (horseweed): 122593861
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Entry
122593861 CDS
T07610
Name
(RefSeq) VPS35 endosomal protein sorting factor-like isoform X1
KO
K25731
VPS35 endosomal protein-sorting factor-like
Organism
ecad
Erigeron canadensis (horseweed)
Brite
KEGG Orthology (KO) [BR:
ecad00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ecad04131
]
122593861
Membrane trafficking [BR:
ecad04131
]
Protein recycling
Others
Retriever complex
122593861
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF2238
Motif
Other DBs
NCBI-GeneID:
122593861
NCBI-ProteinID:
XP_043622247
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Position
3:2615696..2626922
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AA seq
913 aa
AA seq
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MEFKARDYKAKEEAYSLSVTRVSVSSHPLSSLSSSLSSSCSQDDVNIEFFDPLRGVSMEI
TEPVEDMAAAEKSPASQAASHLPAKEWTSFTKLLMQRFPVPKMIPVSSLSSKTIKGSKGI
VELSTKMQSDELNDSQPLSEGGFKSVTQQEYIKRLHQLKDEIMRAWRSDDRVTSLKMSTK
VARLLMDTSVAQFYPTLFVLATDILDMLGDMVWERIREKAEFADDGTKICTLPDDFKASN
ICLEAKETCNNWFRKVASVHELLPRIYLELAIFSCWRFLRDDVVDNLMRLATMIRGIADP
LASAYCRFFLIHCAQKLSQCHSGHLISCINDQNVVLARIVSTKETKYGNFLGDQRLLISL
MEPTIEYNMRCIFKDPTQVANMIVRLDLGKNPSEINGKVPWISIILHYLLKELPTEVVCT
NALEILHLVDCSSDCSYDQCSNYQMLGLKLCEGIFQVNAVNAVIDEVIRVATKRKSLDEY
LKILDAFMDIILQHKMDQYLSFVLSEIFERLCNEVVTENELSSLQSIVVKLVTHFGDMKY
FFELDYLVDILDVMHGSSRSIVSMHILTNATRNDRIDDPTTMKLLFDVAQSLHDNVDFSS
TKQDDNHQAERLIACFVDKVDHGTDLDRHLTFLVECRGAFSSMNDLKEILVHSSNLLATR
ALREKKDNLNFIKSCVTFNEVTIPCIPSYSRQLILYLETAEVSLFGGLISHTDGLLDSAL
GCLQNVYLVDGLRKSNEDADGIVSLIRKLCSFMLLVPGNLEQGVAHIPKSILSLLDSESW
ITPKVRIQVLCSLLSLSATFAQNELPYHAIHEEVIGNDRLFFGHATYFQELGSLSSVILR
NMIDTIQGESSQVTRGKLALEACNCIASFYEVNHEISSVCSKLVETATSCLGADNRYLQS
TIQFVHKESSTCL
NT seq
2742 nt
NT seq
+upstream
nt +downstream
nt
atggaattcaaagcgcgtgattataaagctaaagaagaagcttactctctatcagttact
cgagtttcagtttcttcacatcctttatcttcattatcatcatcattatcatcgtcatgt
tcgcaggatgacgtgaatattgaattctttgatccgttaaggggggtgtcaatggaaatc
acggagcctgttgaagatatggctgctgcagaaaagagtcctgctagtcaagcagcctct
catctccctgcaaaggaatggacatcttttactaagctattaatgcagagattccctgtg
ccaaaaatgataccagtttcttcgttgtcaagcaaaactataaaagggagtaagggaatt
gtagaactatcaacaaagatgcagtcagatgaactgaatgattctcaaccattgtctgaa
ggaggatttaagagtgttacccagcaggaatatatcaaacgcctgcatcaacttaaagac
gagattatgcgtgcttggcgatctgatgatcgtgtgacatctttaaagatgtcaactaag
gttgctaggcttctgatggacacttctgtggcccaattttacccaacgttatttgttcta
gctactgatatactggacatgctaggtgatatggtatgggagcggattagggaaaaagcc
gaatttgcagatgacgggaccaaaatatgcactttaccagatgactttaaagcaagtaat
atatgccttgaagccaaagagacatgcaataactggttcagaaaagttgcttctgtccac
gagcttcttccacgcatttatctcgaacttgcaatattttcatgctggcggttcctgcgt
gatgatgttgtggataacctgatgcgtttggctacaatgataagagggattgcagatcca
ctggcatctgcctactgccgcttctttttgattcactgtgcccagaaactctctcaatgc
cattcggggcatctgatatcttgcattaatgaccaaaacgttgtacttgcacgtattgtg
tccacgaaagaaactaagtatgggaattttttgggagatcaaagattgcttatcagcttg
atggaaccaacgattgaatataacatgagatgtatctttaaagatccaacccaggttgca
aatatgattgtgagacttgatttagggaagaatccatcagagataaatggaaaagttcct
tggatatcaattatcctccattatttacttaaggaacttccaactgaagtagtgtgtact
aatgctttagaaattcttcaccttgttgattgcagcagtgattgttcatatgaccagtgt
tcaaattaccagatgcttggactaaagctctgtgagggaatattccaagtgaatgcagtt
aatgcagtaatcgatgaagttattcgggttgctaccaaaaggaagagtcttgatgagtac
ttgaagatcttggatgcttttatggatattattcttcaacataagatggatcaatatcta
agctttgttctaagtgaaatttttgagagattgtgcaatgaagtggttactgaaaacgaa
ctgtccagcctgcaatcaattgttgtaaagctggtcacccattttggtgatatgaaatac
ttttttgaattagactatcttgttgacatattagatgtcatgcatgggagctcaagaagc
atcgttagtatgcacatccttacaaatgcaacaagaaatgatcgcattgatgatcctacc
acgatgaaactgctttttgatgttgcacagtctctgcatgataatgttgatttctcaagc
actaaacaggatgataatcatcaagcagagcgtttgattgcttgttttgttgataaggtt
gaccatggtacggatctggatcgccatttgacattcttggttgaatgtcgtggagctttt
agcagcatgaatgatttgaaggagatccttgttcattcgagcaatcttttggcaactaga
gctttgagagagaaaaaagataatttaaattttatcaaatcttgcgttacatttaatgaa
gttacaataccatgtattccttcttattccaggcagttaatcttatatcttgaaacggca
gaggtttctttatttggaggactgatttctcatacagatggacttctcgattctgcactc
ggttgcttacaaaatgtttatctggttgatggcttgagaaaatccaatgaagacgctgat
ggtattgtttccttaatcagaaagctatgcagcttcatgctcttggttccaggtaatttg
gaacaaggagttgcccacattccaaagagcatattatctttgcttgattcagaatcatgg
atcacacccaaagtcaggatacaagttttgtgttcacttctttcattatctgcaacattt
gctcaaaatgagctcccataccatgcaattcatgaagaggttattggcaatgaccgttta
ttcttcggtcatgcgacatatttccaagagcttggatcattatctagtgttattcttcgt
aatatgattgatactattcaaggagaatcttctcaggttacccgcggaaagttggcactt
gaagcttgcaactgcattgcctcattttatgaagtgaatcatgagatatcatctgtatgc
tctaagttggtcgagaccgccacatcatgtctcggagctgataatagatacttgcagtcg
acgattcaatttgttcataaagagtcctcaacgtgtctctag
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