Erigeron canadensis (horseweed): 122593908
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Entry
122593908 CDS
T07610
Name
(RefSeq) tRNA wybutosine-synthesizing protein 2/3/4
KO
K15450
tRNA wybutosine-synthesizing protein 3 [EC:
2.1.1.282
]
Organism
ecad
Erigeron canadensis (horseweed)
Brite
KEGG Orthology (KO) [BR:
ecad00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ecad03016
]
122593908
Enzymes [BR:
ecad01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.282 tRNAPhe 7-[(3-amino-3-carboxypropyl)-4-demethylwyosine37-N4]-methyltransferase
122593908
Transfer RNA biogenesis [BR:
ecad03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
122593908
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Kelch_KLHDC2_KLHL20_DRC7
TYW3
Beta-prop_FBX42
Beta-prop_ATRN-LZTR1
TRM5-TYW2_MTfase
Kelch_HCF
Beta-prop_TYW4
Kelch_1
Kelch_2
Kelch_FKB95
TYW2_N_2
NANM
Beta-prop_Calicin
DUF6242_C
MTS
Trm5_N
DNA_methylase
Methyltransf_15
Cons_hypoth95
DUF1668
PrmA
TRM
Methyltransf_25
Motif
Other DBs
NCBI-GeneID:
122593908
NCBI-ProteinID:
XP_043622298
LinkDB
All DBs
Position
3:47227461..47234672
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AA seq
1014 aa
AA seq
DB search
MEFEKRKKASLATMTSPEPDRSPKGDIDAPIIPLLNTINSHPSYFTTSSCSGRISILSTP
ITTATTTVKKKAKGGTWVFITHDPADPKSVQNLIFPTGSTQSEKNQENLVFRFEPLIIAV
ECKDVLSAQKLVSLAISCGFRESGITNVNCKRVIVAIRCSIRLEVPLGCTGKIMVSKEYL
GYLVGIANEKMEANRKRSDSFHEALLKTEFFMRPGIGDFEFLNLNQDSGDEDLLISNGEV
EDIQLTTEVMDEANNGFPELSLPIKPIVITGEPIEKLHLWGHSACTLKTTKDVKSVLVFG
GFGGMGRHARRNDSWLLDSVSGQLELVVFESTPSPRLGHTASLAGDLMFVIGGRADPENV
LNDVWVLNTTTNEWKQAQCSGVDFPQSHRHAAAVIGSSIYVFGGIHNGSISSAMYRLDTR
SLKWEEVSVQGQKPFPRHSHTLVAYGSQLYMFGGHNGVKALGDLYSFDIHSCAWKKENMT
GSIPYARFSHTMFVYKNHIGVIGGCPIRQHYQELSIFKVGSSTWKRMKLNSIGEDLFVRS
TTSIVGDDLVIVGGGASCYAFGTKFSEPMTINLLPLVSSAEICDEIKDQTNIHIEKRSNG
DFNVNLEGTYDKMIVPLHMVLQIDKKHAKPTKDILKKFGWLDAERKVYTQENGVYVYFPI
IKEFGALYQNKIPGLKGVLDDVDDFKLHEVHKVISSARALDLLVALGATTHADDIVRVRK
TSCSPLKLMKENVSLLLNRHSLPLTLLEQLPTRWERLGDIVVIPVTSFKDSAWESLGKEL
WSIVAESLGVCRLARQGRVSPTGTRDSGLEILVGDNGWVDHCENGVIYSFDATKCMFSWG
NLSEKRRMGQLDCKEEVIVDLFAGIGYFTLPFLVKANAKMVYACEWNPHAVKALRRNLEA
NGVADRCVVLEGDNRVTAPKGVAHRVNLGLLPSSEGSWVTAVRALRSQGGMMHVHGNVKD
SEEDAWTEQVSSSIREISKSEGNSWDITVEHVERVKWYAPHIRHLVVDIKCKKA
NT seq
3045 nt
NT seq
+upstream
nt +downstream
nt
atggagtttgagaagagaaagaaagcaagtttagccaccatgacatcacctgagccagac
agatcaccaaaaggagatatagatgcacctattatcccacttcttaataccattaactca
cacccatcttacttcaccaccagttcttgctccggccggatttccatcttatcaacacca
atcaccaccgcaacaaccaccgtaaagaaaaaagccaaaggtggcacctgggtctttatt
acccatgacccagctgaccctaaatcggttcaaaatctcatctttccaactgggtcaact
cagtctgaaaagaaccaagaaaatcttgtgttcaggtttgagcctttgattattgctgtt
gaatgtaaagatgtattgtctgcacaaaagttggtgtctttagctatttcttgtggtttt
agagaatcaggaattacaaatgtgaattgtaaaagagttattgttgcgattagatgttcg
attaggttagaagttccgttgggctgtacggggaagataatggtgtcgaaagagtatttg
gggtatctagttgggattgctaatgagaaaatggaagctaataggaaaagaagtgatagt
tttcatgaagcattgttgaagactgagttctttatgagacctgggattggtgatttcgag
tttttgaacttgaatcaagattcgggtgatgaagatttgttgattagtaatggtgaagtg
gaagatattcaacttacaacagaggttatggacgaagcaaacaatgggtttcctgaactt
agtcttcctatcaaacctatcgtgattactggtgaaccgattgagaagcttcatctctgg
ggccattcagcctgtacactcaaaactacaaaggatgtcaaatcagtccttgtgtttgga
ggttttggaggcatgggaaggcatgcacggagaaatgattcatggcttctagattcagtt
tcaggtcaacttgaattagttgtctttgagagcaccccatcaccacgtttaggtcacacg
gcttctttagcaggtgatcttatgtttgttattggaggtagagctgatccagagaatgtg
ttaaacgatgtctgggttcttaatacaacaacaaacgaatggaagcaggctcagtgtagc
ggggttgactttcctcagagtcatcgacatgcagcagcagtcatagggtcaagtatatat
gtttttggtgggattcacaatggcagcatctcttcagcaatgtataggcttgatacccgc
agcttaaaatgggaagaagtaagtgttcaagggcaaaaaccgtttcctcgtcattcccac
acattagtagcctacggttctcaattgtatatgtttggtggacacaacggggtgaaagca
ctcggagatctttacagttttgatatccattcatgtgcttggaagaaagaaaatatgaca
ggaagtataccgtacgcacggttttcccacaccatgtttgtgtataaaaatcatattggt
gttataggagggtgtcctatcaggcaacactatcaagaattatcaatattcaaagtgggg
tccagtacctggaagcgaatgaagttgaattctattggtgaagatctttttgttcgttcc
acgacaagtattgttggtgatgatcttgttattgtaggcggcggtgcttcctgttatgca
tttggaaccaagtttagtgaaccaatgacaataaacttgcttccattagtttcttctgct
gaaatttgtgatgaaatcaaggatcaaacaaatatccatatcgaaaagagatcaaatggg
gattttaatgtaaatcttgagggtacatatgataagatgatagttcctttgcatatggtt
ttgcaaattgataaaaagcatgcgaaacctacaaaagacatattaaaaaagtttggatgg
ttagacgcggagagaaaagtatacactcaggaaaatggagtttatgtctattttccaatc
atcaaagaatttggggcactttaccaaaataaaataccaggattaaagggagttttggac
gatgtagatgactttaagttgcatgaagtacataaggttatttctagtgcaagagccttg
gatcttttggttgcattaggtgcaacaacacatgctgacgatattgtcagagttcgaaaa
acttcatgctctccactgaaattaatgaaagaaaatgtttctttgttgttaaatcgtcac
agtttgcctttgacactcttagaacaattacccacaagatgggagcgattaggggacatt
gttgtgattcctgtgacttcttttaaagactctgcatgggaatcactaggtaaagagctt
tggtccattgttgcagaatcacttggtgtgtgtcgccttgctcgacaaggcagggtctca
cctaccggaactagagacagtgggctggagattctcgttggggacaatggatgggttgac
cattgcgaaaatggggttatttattcatttgatgctaccaagtgcatgttctcgtggggt
aatctctctgaaaagcgtcgaatggggcagctggactgcaaagaggaagttattgttgac
ttgtttgctggcattggatacttcacattgcctttccttgtcaaggctaatgcaaaaatg
gtgtacgcttgtgaatggaatccccacgctgtcaaggctctgcggcgtaatcttgaagca
aatggtgtcgctgatcgttgtgttgtccttgaaggagataatcgtgttacagcacctaaa
ggagttgcccatcgagtcaatcttggtttgctgccatcaagtgagggtagctgggtgact
gccgtaagggcattaaggagccagggtgggatgatgcatgtgcatggcaatgtgaaggac
tctgaagaggatgcatggacagaacaagtctcgtcatccattagagaaatttcaaagtcg
gaaggtaatagttgggatataacagtagaacatgtagaacgagtaaaatggtatgcgcct
cacattcgccatctcgtagtagacataaaatgcaaaaaagcataa
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