Erigeron canadensis (horseweed): 122593916
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Entry
122593916 CDS
T07610
Name
(RefSeq) probable helicase CHR10
KO
K20092
chromodomain-helicase-DNA-binding protein 1-like [EC:5.6.2.-]
Organism
ecad
Erigeron canadensis (horseweed)
Brite
KEGG Orthology (KO) [BR:
ecad00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ecad03036
]
122593916
Chromosome and associated proteins [BR:
ecad03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
122593916
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Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
HDA2-3
ResIII
Wyosine_form
Motif
Other DBs
NCBI-GeneID:
122593916
NCBI-ProteinID:
XP_043622310
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Position
3:complement(40611667..40620395)
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AA seq
864 aa
AA seq
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MNYEQRLIAAAKYVFDGDSRAAVDAEVNCSDIGVTASLKPHQVEGLSWLIRRYLIGANVI
LGDEMGLGKTLQAISFLSYLKLCRGIHGPFLILCPLSVTDGWVSEVAKFAPKLKVVRYVG
DKQCRRALRWEMYEHVKQQPSSNVQALPFDVILTTYDIALIDQDFLSQIPWHYAVIDEAQ
RLKNPSSVLYNVLREHYIMPRCLLMTGTPIQNSLTELWALMRFCMASIFGTLEQFSFTFK
EARGASIVKEKSKSLKYVLGAFMLRRTKSRLIEAGTLSLPPLTEITLMAPLVTLQKKVYM
SILRKELPKLLALSSGSCNQQSLQNMVIQLRKACSHPYLFAGIEPEPYEEGEHLVQASGK
LMVLDQLLQKLRNSGHRVLLFAQMTHTLDVLQDYMELRKYPYERLDGSIRAEERFAAIRS
FSRHPVLGNSNSEADPDAAFVFMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRA
HRIGQMNHVMSINLVTERTVEEVIMHRAERKLQLSHDVIGDDAIDKEGKDMVGVAAGDLR
SVVLGLRMFDPTTESNESLGQLDMSKLNAMVDKVIAFRHGEPSEAGDPRVETSLKDVLGG
KTSVEFDPILDEASYLSWVEKLKETSETCDVSALEETNKRSKLEEKHLRAESARKKAKEK
KQAKWEAQGYESLSVKNVVPPADDNMLSDSGSVNFVYGDCTHPSKICPSEPSVIFSCVDD
SGNWGHGGMFDALAKLSSQIPSAYERASEFRDLHLGDLHLIDITGEHEENQTANARQLVA
LAVVQTYNSRRKVLRSSISIPELEQCLSKASFSAAQNSASIHMPRIGYQDGSDRSEWYSV
ERILRKYAALYGIKIFVYYFRRSS
NT seq
2595 nt
NT seq
+upstream
nt +downstream
nt
atgaactacgaacagagattaatcgccgccgctaaatacgtcttcgacggagactcacgc
gccgccgtggatgctgaagtcaattgctccgatatcggtgtgacggcctcgcttaagcct
catcaagtggaaggactgtcgtggcttatacgccggtacttaatcggtgccaacgttatt
ctcggagatgagatggggctaggaaagacattgcaagcaatctccttcttgagttatcta
aagctttgtcgaggcatacacgggcccttcttgatactctgtcctctcagtgtaaccgat
ggatgggtatccgaggtcgctaaattcgccccaaagttaaaggttgtccgatacgttgga
gacaaacaatgtagacgagcattgagatgggaaatgtatgaacatgttaaacagcaacca
tcatccaatgtccaggccttacctttcgatgtgatccttacaacatatgatatagcatta
attgatcaagactttctttcccagattccatggcattatgctgttattgacgaggcgcaa
agacttaaaaacccttccagtgttttgtataatgttcttagagaacactatatcatgccc
agatgtctactcatgaccggaacccctattcagaatagccttactgaactttgggcactc
atgcgattctgtatggcttcaatttttgggacattggagcagttctcttttacatttaag
gaagctagaggtgcatcaatagtaaaggagaagtccaaaagcttaaaatatgttttgggg
gcctttatgcttcgaagaacaaaatccaggcttattgaggctggaaccctatctttgcct
cctcttactgaaatcactttgatggctcccttagtgaccttgcagaagaaggtgtatatg
tcaatacttagaaaggagcttcctaaactactagcattgtcttctgggagttgtaatcag
caatccttgcagaacatggtaatacagttgcgtaaagcatgtagtcatccttacctcttt
gctggtatagagcctgaaccttacgaagagggcgaacacttggttcaggctagtggcaaa
cttatggtcttggaccagttacttcagaagctacggaattccggacatcgtgttcttctg
tttgcacagatgacacatacacttgacgtattgcaggactatatggagttgaggaaatat
ccttatgagcgtcttgacggatctattagggctgaagagcgctttgctgcaataaggagt
tttagtcgacatccggtcctgggaaattccaattctgaagctgatcctgacgctgcattt
gtttttatgatctccaccagagcaggaggtgttggcttgaatcttgtagctgctgacacg
gttatattttatgagcaggattggaatccccaggtggataagcaggctctacagagggca
catagaattggtcaaatgaatcatgtgatgtctataaatttagttactgagcgtactgtg
gaggaggttattatgcatagagcagaaagaaagctgcaactaagccatgatgttataggt
gatgacgccatagacaaggaaggcaaagatatggtaggagttgcagctggtgatcttcga
tctgttgtcctaggtttacgcatgtttgatcccactactgagagcaatgagagtttgggt
caactagacatgtcaaaactcaatgctatggttgacaaggtaatagcatttcggcatgga
gaaccatcagaagcaggggatccaagggttgagactagtttgaaggatgtactgggtgga
aagacatctgtggaatttgaccccattctcgatgaagcttcatatctatcttgggtggaa
aagcttaaagaaacatcagagacatgtgatgtttctgctttggaggagacaaataagaga
tcaaaactcgaggagaagcatcttagagccgagtctgccaggaagaaagccaaggagaag
aaacaagcaaaatgggaagctcagggatatgagtcactgtcagtcaagaatgttgtaccc
cctgctgatgacaatatgctgtcagattctggttcagtgaattttgtttatggagattgc
acgcatccctccaaaatttgtccatcagaaccttctgtcatattcagctgtgtggacgat
tccggaaactggggtcacggtggtatgtttgatgccctggctaaactttcatctcaaatt
ccaagtgcttatgagcgagcttctgaatttagggatcttcatcttggtgatctccatctt
atagatattaccggtgagcatgaagagaatcaaactgctaatgctcgtcagttggtagct
ttagctgtggtgcaaacatataattccaggcgtaaagtgcttcgtagtagtatctctatt
cctgaactggaacagtgtttgtcaaaagcttcattttcagcggctcaaaattcagcttct
atccacatgccacgaattggttatcaggatgggtcagaccggtcagaatggtactcagtt
gaacgtattcttcgaaaatacgctgctttatatggcataaagatatttgtgtattatttc
cgacgttcctcttga
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