KEGG   Erigeron canadensis (horseweed): 122593916
Entry
122593916         CDS       T07610                                 
Name
(RefSeq) probable helicase CHR10
  KO
K20092  chromodomain-helicase-DNA-binding protein 1-like [EC:5.6.2.-]
Organism
ecad  Erigeron canadensis (horseweed)
Brite
KEGG Orthology (KO) [BR:ecad00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:ecad03036]
    122593916
Chromosome and associated proteins [BR:ecad03036]
 Eukaryotic type
  Chromatin remodeling factors
   Other chromatin remodeling factors
    122593916
SSDB
Motif
Pfam: SNF2-rel_dom Helicase_C HDA2-3 ResIII Wyosine_form
Other DBs
NCBI-GeneID: 122593916
NCBI-ProteinID: XP_043622310
LinkDB
Position
3:complement(40611667..40620395)
AA seq 864 aa
MNYEQRLIAAAKYVFDGDSRAAVDAEVNCSDIGVTASLKPHQVEGLSWLIRRYLIGANVI
LGDEMGLGKTLQAISFLSYLKLCRGIHGPFLILCPLSVTDGWVSEVAKFAPKLKVVRYVG
DKQCRRALRWEMYEHVKQQPSSNVQALPFDVILTTYDIALIDQDFLSQIPWHYAVIDEAQ
RLKNPSSVLYNVLREHYIMPRCLLMTGTPIQNSLTELWALMRFCMASIFGTLEQFSFTFK
EARGASIVKEKSKSLKYVLGAFMLRRTKSRLIEAGTLSLPPLTEITLMAPLVTLQKKVYM
SILRKELPKLLALSSGSCNQQSLQNMVIQLRKACSHPYLFAGIEPEPYEEGEHLVQASGK
LMVLDQLLQKLRNSGHRVLLFAQMTHTLDVLQDYMELRKYPYERLDGSIRAEERFAAIRS
FSRHPVLGNSNSEADPDAAFVFMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRA
HRIGQMNHVMSINLVTERTVEEVIMHRAERKLQLSHDVIGDDAIDKEGKDMVGVAAGDLR
SVVLGLRMFDPTTESNESLGQLDMSKLNAMVDKVIAFRHGEPSEAGDPRVETSLKDVLGG
KTSVEFDPILDEASYLSWVEKLKETSETCDVSALEETNKRSKLEEKHLRAESARKKAKEK
KQAKWEAQGYESLSVKNVVPPADDNMLSDSGSVNFVYGDCTHPSKICPSEPSVIFSCVDD
SGNWGHGGMFDALAKLSSQIPSAYERASEFRDLHLGDLHLIDITGEHEENQTANARQLVA
LAVVQTYNSRRKVLRSSISIPELEQCLSKASFSAAQNSASIHMPRIGYQDGSDRSEWYSV
ERILRKYAALYGIKIFVYYFRRSS
NT seq 2595 nt   +upstreamnt  +downstreamnt
atgaactacgaacagagattaatcgccgccgctaaatacgtcttcgacggagactcacgc
gccgccgtggatgctgaagtcaattgctccgatatcggtgtgacggcctcgcttaagcct
catcaagtggaaggactgtcgtggcttatacgccggtacttaatcggtgccaacgttatt
ctcggagatgagatggggctaggaaagacattgcaagcaatctccttcttgagttatcta
aagctttgtcgaggcatacacgggcccttcttgatactctgtcctctcagtgtaaccgat
ggatgggtatccgaggtcgctaaattcgccccaaagttaaaggttgtccgatacgttgga
gacaaacaatgtagacgagcattgagatgggaaatgtatgaacatgttaaacagcaacca
tcatccaatgtccaggccttacctttcgatgtgatccttacaacatatgatatagcatta
attgatcaagactttctttcccagattccatggcattatgctgttattgacgaggcgcaa
agacttaaaaacccttccagtgttttgtataatgttcttagagaacactatatcatgccc
agatgtctactcatgaccggaacccctattcagaatagccttactgaactttgggcactc
atgcgattctgtatggcttcaatttttgggacattggagcagttctcttttacatttaag
gaagctagaggtgcatcaatagtaaaggagaagtccaaaagcttaaaatatgttttgggg
gcctttatgcttcgaagaacaaaatccaggcttattgaggctggaaccctatctttgcct
cctcttactgaaatcactttgatggctcccttagtgaccttgcagaagaaggtgtatatg
tcaatacttagaaaggagcttcctaaactactagcattgtcttctgggagttgtaatcag
caatccttgcagaacatggtaatacagttgcgtaaagcatgtagtcatccttacctcttt
gctggtatagagcctgaaccttacgaagagggcgaacacttggttcaggctagtggcaaa
cttatggtcttggaccagttacttcagaagctacggaattccggacatcgtgttcttctg
tttgcacagatgacacatacacttgacgtattgcaggactatatggagttgaggaaatat
ccttatgagcgtcttgacggatctattagggctgaagagcgctttgctgcaataaggagt
tttagtcgacatccggtcctgggaaattccaattctgaagctgatcctgacgctgcattt
gtttttatgatctccaccagagcaggaggtgttggcttgaatcttgtagctgctgacacg
gttatattttatgagcaggattggaatccccaggtggataagcaggctctacagagggca
catagaattggtcaaatgaatcatgtgatgtctataaatttagttactgagcgtactgtg
gaggaggttattatgcatagagcagaaagaaagctgcaactaagccatgatgttataggt
gatgacgccatagacaaggaaggcaaagatatggtaggagttgcagctggtgatcttcga
tctgttgtcctaggtttacgcatgtttgatcccactactgagagcaatgagagtttgggt
caactagacatgtcaaaactcaatgctatggttgacaaggtaatagcatttcggcatgga
gaaccatcagaagcaggggatccaagggttgagactagtttgaaggatgtactgggtgga
aagacatctgtggaatttgaccccattctcgatgaagcttcatatctatcttgggtggaa
aagcttaaagaaacatcagagacatgtgatgtttctgctttggaggagacaaataagaga
tcaaaactcgaggagaagcatcttagagccgagtctgccaggaagaaagccaaggagaag
aaacaagcaaaatgggaagctcagggatatgagtcactgtcagtcaagaatgttgtaccc
cctgctgatgacaatatgctgtcagattctggttcagtgaattttgtttatggagattgc
acgcatccctccaaaatttgtccatcagaaccttctgtcatattcagctgtgtggacgat
tccggaaactggggtcacggtggtatgtttgatgccctggctaaactttcatctcaaatt
ccaagtgcttatgagcgagcttctgaatttagggatcttcatcttggtgatctccatctt
atagatattaccggtgagcatgaagagaatcaaactgctaatgctcgtcagttggtagct
ttagctgtggtgcaaacatataattccaggcgtaaagtgcttcgtagtagtatctctatt
cctgaactggaacagtgtttgtcaaaagcttcattttcagcggctcaaaattcagcttct
atccacatgccacgaattggttatcaggatgggtcagaccggtcagaatggtactcagtt
gaacgtattcttcgaaaatacgctgctttatatggcataaagatatttgtgtattatttc
cgacgttcctcttga

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