Erigeron canadensis (horseweed): 122594002
Help
Entry
122594002 CDS
T07610
Name
(RefSeq) glycogen phosphorylase 1-like isoform X1
KO
K00688
glycogen phosphorylase [EC:
2.4.1.1
]
Organism
ecad
Erigeron canadensis (horseweed)
Pathway
ecad00500
Starch and sucrose metabolism
ecad01100
Metabolic pathways
ecad01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
ecad00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
122594002
Enzymes [BR:
ecad01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.1 glycogen phosphorylase
122594002
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Phosphorylase
ACT_ACR9_3rd
Motif
Other DBs
NCBI-GeneID:
122594002
NCBI-ProteinID:
XP_043622408
LinkDB
All DBs
Position
3:45858764..45868234
Genome browser
AA seq
1018 aa
AA seq
DB search
MSLFHPFRIIAIKYNQPKIKKIQSLFTPTSFTIKKHSSFTFFQHNAVKNAAKHVSKSLMQ
DSSGNTSSVTVEKDVSNGVVFVIKVQEKNMGLLQMITRVLKGLKIEKPTIEFNEKEDLFV
VKFFVTDLNGKKVEDKESLVKIKTLLMEAINGSEGVVVKKAGFFGGNKSDKMFELMDGFL
KNDPTSLQKDILHHVEYTVARSRFSFDDFEAYKALSHSVRDRLIERWHDTQQHFKKKDPK
RLYFLSLEFLMGRSLSNSVINLGIRDQCAEALSQLGFEYEVLAEQEGDAALGNGGLARLS
ACQMDSLATLDYPAWGYGLRYQYGLFRQIILDGFQHEQPDYWLNFGNPWEIERVHVSYPV
KFYGSVNEEVVNGKKCKVWIPKETVSCFTMKLFPLFYNFLILNFRSLSSACLQVEAVAYD
NPIPGYGTRNTITLRLWAAKPSDGIDMESYNTGDYINAIVNRQKAEIISNVLYPDDRSYQ
GKELRLKQQYFFVSASLQDIIRRFKDVHGNFDDFPDKVALQLNDTHPSISIAELMRVLLD
EEHLGWKRAWNITRQVFSFTTHTVQPAALEKVPADLFENVLPRHLQIIYDINFSFMEELK
KKIGQDYVRLSSMSIIEEGATKNIRVANLSVVCSHTVNGVSRAHFELLKTRVFPDFYELW
PEKFQYQTNGVTQRRWIVVSNPSLCALISKWLGTESWIRDINLLAGLREYASNADLQQEW
MTVKKTNKMRLAEYIETMSGVKVSLDSMFDVQIKRIHEYKRQLLNILGVIHRYDCIKNME
ESERKKVVPRVCIIGGKAPPGYEIAKKIIKLCHAVAETINNDIDVGDLLKLVFIPDYNVS
VAELVIPGSDLSQHISTAGHEASGTGSMKFLMNGCLLLATADGSTNEIIEEIGAENMFIF
GAKINEVPALREKESTIEAPLQFARVVRMVRDGYFGFKEYFKSLCDSVENGKDFYLVGSD
FVSYIEAQAAADKAYVDKEKWSEMSILCTAGSGRFSSDRTIEDYAQKSWGIQPCKCPS
NT seq
3057 nt
NT seq
+upstream
nt +downstream
nt
atgtctttattccatccattccgtattatcgcaataaaatataatcagccaaaaattaaa
aagattcaatctttatttacacccacatcatttacaattaaaaagcattcatcttttacc
ttttttcagcacaatgcagttaaaaatgctgctaaacatgtgtccaaatctttaatgcaa
gattctagtggtaacacttcatctgtgacagttgaaaaagatgtatcaaacggtgtcgtt
tttgttattaaagttcaagaaaaaaacatgggcttgcttcaaatgatcactagggtttta
aaagggcttaaaattgaaaagcccacaattgaatttaatgaaaaagaagatctttttgtg
gtaaagttttttgttactgatttaaatggtaaaaaagtcgaagataaagaaagtttggta
aaaatcaagactttgttaatggaagctattaatgggagtgaaggtgttgtggtaaaaaaa
gcagggttttttggtggtaataaaagtgacaaaatgtttgaattaatggatggttttttg
aaaaatgatccaacaagccttcaaaaagatattcttcatcatgttgagtacacagttgca
agatcaagattcagttttgatgattttgaagcttataaggccttgtcacatagtgtgaga
gacagattgattgagcgttggcatgatactcaacaacatttcaaaaagaaagatcctaaa
cgattatactttctatcgctcgagtttctaatgggtcgttcgttgtcaaatagtgtgatt
aatttaggcatacgagatcaatgtgctgaagcattaagtcagcttggatttgagtatgaa
gttttggcagagcaggaaggagatgcagctcttgggaatggtggtttggcccgcctttcc
gcttgccaaatggattctttagcaacattggattatcctgcttggggatatgggttgcgt
taccagtatggactatttagacagataatattggatgggttccagcatgaacagcctgat
tattggttgaactttggaaatccttgggaaatagagcgggtccatgtatcatatcctgtt
aagttttatggaagcgtaaacgaggaagttgtgaacggaaaaaagtgtaaagtttggatt
cctaaagaaaccgtgagttgtttcaccatgaaacttttcccccttttctataatttttta
attctcaattttagatcgttgtcttccgcttgtttgcaggttgaagctgttgcttatgac
aatcctatacctgggtatggaacaaggaacacaatcactcttcgtttatgggctgctaaa
ccgagtgatgggattgacatggagtcttataacactggagattatatcaatgctattgta
aacagacaaaaggcagagataataagcaatgtcttataccctgatgatcgttcttatcag
ggaaaagaactacggctaaagcaacaatatttctttgtctcggcatcattgcaagatatt
attcggaggtttaaagatgtgcatggaaactttgatgacttcccggacaaggttgctttg
cagttgaatgatactcatccatctatttccatagctgagctcatgagggtgcttcttgat
gaagaacatttgggctggaaaagggcatggaatatcacacgccaagttttttcttttact
acacatacagtacaacccgcagcattggaaaaggtccctgcagatctatttgagaacgtt
ttaccccgtcatttacaaattatatatgacataaacttttcattcatggaggagttgaaa
aagaagatagggcaggattatgttcgcctatcttcgatgtcaatcattgaggaaggtgct
accaagaatattcgagtggcgaatctatccgttgtttgctctcacaccgttaatggggta
tccagagctcattttgaattgctaaaaacacgagtattcccggatttttatgaactatgg
ccagagaaatttcagtaccagacaaacggagttactcagcgtcgttggatcgtagtaagc
aatccctcactgtgtgctcttatctcgaagtggctcggtacagaatcttggatccgtgat
atcaacctcttagcgggtctgagagaatatgcatcaaatgctgacctacaacaagaatgg
atgacggtgaagaagaccaataaaatgaggcttgctgaatacattgaaactatgagtgga
gtgaaggttagcttggattcaatgtttgatgtgcagataaagagaatacatgaatataaa
agacagttgttgaatatattaggtgtaattcatcgatatgactgcataaagaatatggag
gaaagtgagaggaaaaaggttgtacctcgtgtatgcataattggtggaaaagctcctcct
ggatatgagattgcaaagaagatcattaagctttgccatgctgttgcagaaacaataaac
aatgacattgatgttggcgaccttcttaaactggttttcattcctgattacaatgtttcg
gttgctgaattagttattcctggaagtgacctttcacaacacatcagcacggcaggacat
gaggcatcaggaaccggaagcatgaaatttctaatgaacggatgtttgttgcttgccaca
gctgatggatcaacaaatgaaatcattgaagaaataggtgcagaaaacatgttcatattt
ggagcaaagatcaatgaagttcctgcattgcgtgagaaagaatccaccatagaagcaccc
cttcaatttgcacgtgtagtaaggatggtgagggatggatattttggattcaaagagtac
ttcaaatccttgtgtgactctgttgaaaatggcaaagatttctatctcgtggggtctgac
ttcgttagctatatagaagctcaggctgctgcagataaagcgtatgtcgacaaggagaaa
tggagtgagatgagcatactatgtactgctggttccggaagatttagcagcgatcgcaca
attgaagattatgcacagaaatcatggggaattcagccctgtaagtgcccatcctaa
DBGET
integrated database retrieval system
