Erigeron canadensis (horseweed): 122594138
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Entry
122594138 CDS
T07610
Name
(RefSeq) RNA-binding protein 28
KO
K14573
nucleolar protein 4
Organism
ecad
Erigeron canadensis (horseweed)
Pathway
ecad03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
ecad00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
122594138
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ecad03009
]
122594138
Ribosome biogenesis [BR:
ecad03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
122594138
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_Rrp7
Motif
Other DBs
NCBI-GeneID:
122594138
NCBI-ProteinID:
XP_043622546
LinkDB
All DBs
Position
3:30293021..30303908
Genome browser
AA seq
1017 aa
AA seq
DB search
MGKNKKKMMNPDSGGPQHSPATVFVNNLPYTFSNAQLEETFSDVGPIRRCFMVTQKGSSE
HRGFGYVHFAVTEDANRAIELKNGSSVGGRTVGVKHAMHRPSLEQRRSKGTEVVPSTIKA
NGGKDDFVSDSIKTVDGKENSLFQSADTIKTKDDKDESSKPVQKRKQSMNSQEIGKTDKK
KEVKPMKAELVEGDSSTLIVKPKKAPNSQDKGKIDKKKEVNPVKAELVEGDSSTPIVKPK
TAPNSQDKGKSDKTKKAMAPLKTERVDGTSSEKQRVARTVIIGGILNNDMAEDVHRHARE
CGSVSSITYPLSKEEITHHGLLQDGCRLGASSIVYDSVKSARACVTKLHQKSLSGGTVWA
RQLGGEGSKVQKWKLIIRNLPFKATINEIKEMFASAGFVWDVYIPKKPDSALSRGFAFVK
FTCKQDAETAIQKFNGNSFGKRPIAVDWAVPKNIYTADAQVAQKDDQEESDDEEDFNRDL
EDDNAEMNSNTHHSHGDADVSDGSDLVKEEVNFDDEADVTKKVLNNLLSLKGPVAPVNDD
FISVQKKKDDGIVNLPNKESESLTKNESSAKTEKTNIKPVETEEELERTLFICNLPFDIT
NDEIKQRFTGFGEIQSFVPVLHPVTKRPRGTGFLKFKTLDAADAAFAAATSVAGLGIILK
GRQLKVLKALNKKAAHDKEVEKTKKEEIDHRNLYLAKEGLILEGTPAAEGVSDSDMSKRR
SLEQKKATKLKSPNFHVSRTRLIMYNVPKAMNEKQLKRLCLDAVTSRATKQKPTIRQIKL
LKDSVKGKEVSKNHSRGVAFIEFTEHQHALVALRVLNNNPETFTAEHRPIVEFALDNVQT
LRQRNDKIEAQQQGFGNDVESTNKKTDFHKPADRSNDMSRKRKTPDTLQESRNTKGMEAE
PKPNMKKHIDSKKSLEGQQGKRKKGHEAAIDKITSGTVRPTRVAVVPMKKRTRDQKEIQI
EDKTSKRRKNKDPLGQDTVDKLDMLIEQYTNKFSGNRTNKNDGEKQGSKRLGRWFQT
NT seq
3054 nt
NT seq
+upstream
nt +downstream
nt
atgggcaaaaacaagaagaagatgatgaacccagattccggtggaccccagcacagtccg
gccaccgtctttgttaataatctgccttacactttctctaatgctcagttggaagaaaca
ttcagtgatgttggaccaattaggaggtgttttatggttacacaaaaagggtcgtctgaa
catcgcggctttggttatgtccacttcgccgtgactgaagatgctaaccgtgcaattgag
cttaaaaatggttcttctgttggaggtcgcactgttggagttaaacatgcaatgcatagg
ccttctcttgagcaacggagatctaaaggaacagaagtggttccatctactatcaaggca
aatggtggcaaggatgattttgttagtgacagtatcaagacagtggatggtaaggaaaat
tcattgtttcagtcagctgataccatcaagacgaaggatgacaaggacgaatcttcaaaa
cctgtacaaaagcgtaaacagtccatgaattctcaagaaataggaaaaactgataagaag
aaagaagtcaaacccatgaaggctgaacttgtggaaggtgattcatcaacactaatagta
aagccaaagaaggctcccaactctcaagataaaggaaaaattgataagaagaaagaagtc
aatcccgtaaaggctgaacttgtggaaggtgattcatcaacaccaatagtaaagccaaag
acggctcccaactctcaagataaaggaaaaagtgataagacgaagaaagctatggctccc
ttgaagaccgaacgtgtggatggaacttcttctgaaaagcagagggttgctaggacagtc
ataattggtgggattctcaataatgatatggcagaagatgttcaccgtcatgctagagag
tgtgggtctgtgtcttctataacttaccctctttctaaagaagagattacacatcatgga
cttcttcaagatggatgcagattaggtgcctcatctatagtttatgacagtgtcaagtca
gctcgggcttgtgtcacaaagttacatcagaaaagtttaagtggaggcacggtttgggca
cgccagttaggtggagaaggttccaaggtacagaaatggaagcttattatacggaatctt
ccattcaaggcaactatcaatgagatcaaagaaatgtttgcatcagcaggctttgtgtgg
gatgtgtatattcctaaaaaacctgattcagcgctgtcaaggggatttgcatttgtcaaa
ttcacatgcaagcaggatgcagaaactgcaattcagaagttcaatggaaacagttttggt
aaaaggccgatagctgtcgattgggctgttccaaagaatatatatacagctgatgctcaa
gttgcacaaaaagatgatcaggaagaaagtgacgatgaagaggattttaatagggatttg
gaggatgataatgctgagatgaacagtaatacacatcattctcatggagatgctgatgtg
tcagatggctctgatttagtaaaagaagaagtgaattttgatgacgaagcagatgtcaca
aaaaaagttttaaataacttgctttcattgaaaggacctgttgcccctgtcaatgatgat
tttatctctgttcagaagaaaaaggatgatggaatcgtaaatttaccaaacaaagaatct
gagagtttaaccaaaaatgaaagttcggctaaaactgaaaagacaaatataaaaccagtc
gagacagaagaagagttggagagaacactctttatctgtaatcttccctttgatattact
aatgacgaaatcaaacagcgtttcacaggatttggtgaaatccagtcgtttgtacctgtt
ctccatccggttaccaagagaccgaggggaactggatttcttaagtttaaaacacttgat
gctgctgatgctgcatttgcagcagcaacttctgtagctggtttgggtattattctcaaa
ggcagacaactaaaagttttgaaggccttgaataagaaagcagcccatgataaggaagta
gaaaagacgaaaaaggaagagattgaccaccgcaatctctacttagctaaggaaggtctt
attcttgagggtacccctgccgctgaaggagtttcagatagcgacatgtcaaagcgtcga
tcgttggagcagaagaaggcaaccaagcttaaatcaccaaatttccatgtttcaaggacg
aggctcatcatgtacaatgtacccaaggcaatgaatgaaaaacaactaaaaagactttgc
ttagatgctgttacatctcgtgctacgaaacaaaagcctacaattcgacagattaagttg
ttgaaggattctgtcaaaggaaaagaagtttcaaagaatcattctcgtggggttgcattt
atcgagttcacagaacatcaacatgccctcgtggctcttagagttcttaataacaatcct
gaaacttttactgccgagcatcgtccaattgtggaattcgctcttgacaatgttcaaaca
ttgaggcagcgtaacgataagattgaagctcagcagcaaggatttggaaatgatgtagaa
agcacgaacaagaaaactgattttcacaaaccagctgacaggtcgaatgacatgtcaaga
aaacgcaaaaccccagatactttacaagaaagtaggaatactaaagggatggaagcggaa
cctaaacccaacatgaaaaagcatattgactctaagaaatctttagagggccagcaggga
aaacgaaagaagggtcatgaagcagccattgacaaaatcacctccggtacagtccggcct
acacgtgtagctgtcgtgcccatgaaaaagaggacacgagatcaaaaggagatacagatt
gaagataaaacttcaaagagaaggaaaaacaaagatccattagggcaagatacggtggac
aaactagacatgcttattgaacaatatacaaacaagttctcagggaaccgaaccaataaa
aatgatggcgaaaagcaaggttcaaaacggctaggacggtggttccaaacatag
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