KEGG   Erigeron canadensis (horseweed): 122594314
Entry
122594314         CDS       T07610                                 
Name
(RefSeq) autophagy-related protein 18a
  KO
K22991  WD repeat-containing protein 45
Organism
ecad  Erigeron canadensis (horseweed)
Brite
KEGG Orthology (KO) [BR:ecad00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:ecad04131]
    122594314
Membrane trafficking [BR:ecad04131]
 Autophagy
  Other autophagy associated proteins
   Others
    122594314
SSDB
Motif
Pfam: PROPPIN Beta-prop_THOC3 BCAS3_WD40 Beta-prop_IFT122_1st Beta-prop_WDR5 Beta-prop_EML_2 WD40 WD40_WDHD1_1st WD40_CDC20-Fz Beta-prop_WDR3_1st Beta-prop_WDR36-Utp21_1st ANAPC4_WD40 WD40_Prp19 Beta-prop_RSE1_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_IFT140_2nd CFAP251_N EIF3I WDR55 Beta-prop_WDR36-Utp21_2nd Beta-prop_EML Beta-prop_Vps41 Beta-prop_HPS5 Beta-prop_WDR3_2nd Ge1_WD40 WD40_Gbeta Beta-prop_WDR19_1st WD40_MABP1-WDR62_2nd Beta-prop_VPS8 Tricorn_2nd Beta-prop_TEP1_2nd
Other DBs
NCBI-GeneID: 122594314
NCBI-ProteinID: XP_043622727
LinkDB
Position
3:39219491..39224332
AA seq 402 aa
MATVSTLSSPAWPNPDPEPNPTQEIETEATDTTTTSDDHHQQQLPDSLPQKTTNHPVYSI
SLHHVSFNQDNGCFACGINNGFRIHNCDPFREIFRRDFETGGIGIVQMLFRCNILALVGG
GPNPQYPLNKVMIWDDHQGRCIGELSFRSEVKGVRLRRDRIIVILEQKIFVYNFTDLKLL
QQIETFGNPKGLCEVSQGSGVGGFVLVCLGLRKGQVRVEHYGSKRTKFILAHDSRIACFG
LSQDGGMIATASNKGTLVRVFNTHDGTLLHEVRRGADRAEIYSLAFSPTAEWLAVSSDKG
TIHVFSISAVDNPDHNAPGSPSSSPRALIKGVMPKYFSSVWSLAQFRLVEGSQYIAAFGH
QKNTVVILGMDGSFYRCKFDPKTGGEMTQLEYHNFVKPDDSF
NT seq 1209 nt   +upstreamnt  +downstreamnt
atggcaaccgtctctaccttgtcttctccggcttggccaaaccctgaccctgaacctaac
ccaacccaagaaatcgaaaccgaagccaccgacacaacaaccacatccgacgaccaccac
cagcagcagcttcccgacagtctcccacaaaaaacaacaaaccatcccgtatattcaatc
agcctgcaccacgtgtcattcaaccaagacaacggatgtttcgcctgtggtatcaacaac
gggttccggatccacaactgcgacccgtttcgcgaaatcttccgtcgcgatttcgaaacg
ggcggaatcgggatagtccagatgctgttccgctgcaacattctagccttagttggtggt
gggcccaatcctcaatacccattaaacaaagtcatgatttgggatgatcatcaaggcaga
tgtatcggtgagctttcgtttcggtccgaagttaaaggggttcgattacgtagagaccga
ataattgtgatccttgaacagaaaatatttgtgtataattttactgatttgaaattgttg
caacaaattgagacttttgggaacccgaaagggctgtgtgaggtttcgcaggggtccggg
gttggtgggtttgtgcttgtgtgtttaggattgagaaaagggcaagtgagagttgaacat
tatggttctaagaggactaagttcatcttggctcatgattcgaggattgcctgttttggt
ttgtcacaagatggtgggatgattgctaccgcgagtaataaggggacgcttgttcgggtt
ttcaatacgcatgacggcaccttgttgcacgaggtaaggagaggtgcagatagagcagag
atatacagccttgcattttcgcctactgctgagtggctagcagtctcaagtgacaagggc
accattcatgtgttcagcatctcagctgtcgataatccggatcataatgcccctggttct
ccatctagctcacctcgcgctcttattaaaggagttatgccaaagtattttagctctgtg
tggtcattggcccagtttcgtttggtggaaggttctcagtatattgctgcattcggtcat
caaaagaatacagtggttattctcggcatggatggaagcttctatagatgcaagtttgac
ccaaaaacgggtggggagatgactcaactggaatatcacaactttgtaaagcctgatgac
tctttctaa

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