Erigeron canadensis (horseweed): 122594406
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Entry
122594406 CDS
T07610
Name
(RefSeq) exopolygalacturonase-like
KO
K01213
galacturan 1,4-alpha-galacturonidase [EC:
3.2.1.67
]
Organism
ecad
Erigeron canadensis (horseweed)
Pathway
ecad00040
Pentose and glucuronate interconversions
ecad01100
Metabolic pathways
Module
ecad_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
ecad00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
122594406
Enzymes [BR:
ecad01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.67 galacturonan 1,4-alpha-galacturonidase
122594406
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Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
TPS
Motif
Other DBs
NCBI-GeneID:
122594406
NCBI-ProteinID:
XP_043622804
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Position
3:complement(31288647..31290322)
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AA seq
418 aa
AA seq
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MIGNPKYKAQKEVKTSLKMGKKSYIQRAICSLFLMASITMNHSAVIDIKAKGAKADGKTD
DGPVLMAAWKEACNGPPPSSLVIPAGTYLVLPPIMLAGPCKGPIEIKATGATIKAPPELA
KFKENRWITIRDVDKLTWTGGNLDGQGQAVWKGNQCAKTASCALPPNIGFTRINNSLVKD
LTSTNSKFFHINILGCDNTNFDHITVNAPGDSVNTDGIHIGRLNNLNITNSVIKTGDDCI
SFGDGSKNVRVEKVTCGPGHGISIGSLGRYKDELPVQGIWVKNCTIIGTQNGVRIKSWPN
GTPGTASDMHFEDIIMDKVMNPVIIDHQYCPSGHCDKGPTKVKMSNISFRKIKGTSATKV
AVKLICSQGFCDNVEVGDINLVFQGAGGGATSECTNVKPKVVGQVVPPVCTSAPKSKI
NT seq
1257 nt
NT seq
+upstream
nt +downstream
nt
atgattggaaaccccaaatataaggctcagaaggaagtaaaaacttcattaaaaatgggt
aaaaaaagctacattcaaagagcaatatgtagcttgtttcttatggcatcaattacaatg
aaccattctgctgtcattgatataaaagctaaaggtgcaaaggctgatggtaaaactgat
gatggcccggtgttaatggccgcttggaaagaagcatgtaatgggccaccaccaagctcg
ctggttattccagccgggacatatctagtacttcctccaattatgttagctggtccttgc
aagggtccgattgagatcaaggctaccggagccactataaaggctcctcccgaacttgca
aagttcaaagaaaataggtggatcacgatcagggacgttgataaattaacatggactggt
ggtaaccttgacggtcaagggcaagctgtatggaaaggtaaccaatgcgctaagactgca
tcatgcgctctgccacccaatattgggtttaccagaatcaataattcattagtaaaagat
ttaacatctacaaatagcaaattttttcacattaatatattgggttgtgacaacaccaat
tttgaccacattactgttaatgcacccggagacagtgttaacacagatggaattcatatc
gggcggttaaacaacctcaacatcacaaactcagttataaaaactggtgatgattgtatt
tcctttggagacggtagcaagaacgtccgtgtagaaaaggtgacatgtggaccaggacat
ggcatcagtattggaagcttgggtaggtataaagatgaattacctgtacaaggaatttgg
gtcaagaattgtaccatcattggaacccaaaatggagttaggatcaaaagttggcctaat
ggtactcctggaaccgcgagtgatatgcattttgaagacatcatcatggacaaagtgatg
aatcctgttataatcgatcatcaatattgccccagtggacactgtgacaaaggtccaaca
aaagtgaagatgtccaacataagctttaggaagatcaagggaacatcggcaacaaaagta
gcagtgaagcttatttgcagccaaggattttgtgacaacgtggaggtcggagatatcaac
ttggtatttcaaggagccggaggaggagccacctccgaatgtacaaacgttaaacccaaa
gtcgtcggccaagttgtccctccagtttgtacaagtgcgcccaaatctaaaatatga
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