Erigeron canadensis (horseweed): 122594634
Help
Entry
122594634 CDS
T07610
Name
(RefSeq) WD-40 repeat-containing protein MSI1-like
KO
K10752
histone-binding protein RBBP4
Organism
ecad
Erigeron canadensis (horseweed)
Pathway
ecad03082
ATP-dependent chromatin remodeling
ecad03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
ecad00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
122594634
03083 Polycomb repressive complex
122594634
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ecad03036
]
122594634
Chromosome and associated proteins [BR:
ecad03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
CAF-1
122594634
Histone modification proteins
HAT complexes
HATB complex
122594634
HDAC complexes
Sin3A-HDAC complex
122594634
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
122594634
PRC2.2
122594634
Centromeric chromatin formation proteins
Kinetochore proteins
MIS16-MIS18 complex
122594634
Heterochromatin formation proteins
Other heterochromatin formation proteins
122594634
Chromatin remodeling factors
NuRD complex
122594634
NuRF complex
122594634
NuRF complex (fruit fly)
122594634
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_EIPR1
Beta-prop_RIG_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_EML_2
WDR55
WD40_WDHD1_1st
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
WD40_RFWD3
Beta-prop_WDR75_1st
EIF3I
ANAPC4_WD40
Beta-prop_WDR90_POC16_2nd
Beta-prop_RIG_1st
Beta-prop_WDR19_1st
Beta-prop_EML
MIOS_WD40
Beta-prop_IFT140_1st
eIF2A
Beta-prop_HPS5
Beta-prop_NUP159_NUP214
Beta-prop_IFT122_1st
Motif
Other DBs
NCBI-GeneID:
122594634
NCBI-ProteinID:
XP_043623000
LinkDB
All DBs
Position
3:complement(27180018..27189009)
Genome browser
AA seq
280 aa
AA seq
DB search
MPQDASIIATKTNDSEVCIFDCKNHSAKPPRGGKIKSSPDLRLMGHSHEGFGLSWSKFKK
GLLLSGSYDSKVCLWDINQIPQNKAIDALQTFEFHKGPVEDVAWHLKHYYLFASCSADRY
LHIYDLRSECTCRPDQKLMAHQSEVTCLSFNPFNEWLVATGSTDSTVKLFDLRKFVAPLH
TFKRHEDEVIQIGWSPHDETILASSCTGRRLMVWDASRIGEKQTSKDGEDGPPELLFIHG
GHTDKVPDFSWNPTEDWLIASVANDNMLQVWQMADHIYSD
NT seq
843 nt
NT seq
+upstream
nt +downstream
nt
atgcctcaagatgcttccatcattgctaccaagactaacgactctgaagtctgtatattt
gattgtaagaatcattccgctaagcctcctcgtggaggaaaaattaaaagcagtccggat
ttaagactgatgggccacagccatgaaggatttggcttatcgtggagtaagtttaagaag
ggtcttttattaagtggctcttatgattccaaggtatgcttgtgggacattaatcagatc
ccgcagaataaagctattgatgcattgcaaacatttgagtttcataaaggtccagtggaa
gatgtagcatggcatttgaagcattactatttatttgcttcatgtagcgctgaccgatac
ttgcacatatatgatttgcggtctgaatgcacctgcagacctgaccaaaagttaatggct
caccaaagtgaggttacctgcttgtcattcaatcctttcaatgaatggctcgtggcaacg
gggtctacagactccactgtgaagctatttgatttgcggaaattcgttgctcctctacat
accttcaagcgccatgaggatgaggtaattcaaattgggtggagtccacatgatgagaca
attttagcttctagttgtactggtaggagactcatggtgtgggatgctagtaggattggt
gagaaacaaacgtccaaggatggagaagatggtcccccagagttgctttttatccatggt
gggcatacagataaagttccagatttttcatggaacccaactgaagactggctcattgct
agtgttgccaacgataacatgctccaagtctggcagatggctgaccacatatacagtgac
taa
DBGET
integrated database retrieval system
