KEGG   Erigeron canadensis (horseweed): 122594865
Entry
122594865         CDS       T07610                                 
Name
(RefSeq) SKP1-like protein 7 isoform X1
  KO
K03094  S-phase kinase-associated protein 1
Organism
ecad  Erigeron canadensis (horseweed)
Pathway
ecad03083  Polycomb repressive complex
ecad04120  Ubiquitin mediated proteolysis
ecad04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:ecad00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    122594865
   04120 Ubiquitin mediated proteolysis
    122594865
  09126 Chromosome
   03083 Polycomb repressive complex
    122594865
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:ecad04131]
    122594865
   04121 Ubiquitin system [BR:ecad04121]
    122594865
   03036 Chromosome and associated proteins [BR:ecad03036]
    122594865
Membrane trafficking [BR:ecad04131]
 Endosome - Lysosome transport
  Acidification regulators
   RAVE complex
    122594865
Ubiquitin system [BR:ecad04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   SCF complex
    Adaptor protein
     122594865
   Cul7 complex
     122594865
Chromosome and associated proteins [BR:ecad03036]
 Eukaryotic type
  Histone modification proteins
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.1)
     122594865
  Centromeric chromatin formation proteins
   Kinetochore proteins
    CBF3 complex
     122594865
SSDB
Motif
Pfam: TssC_VipB_C Skp1 VHP DTP-pb9_A-dom_N
Other DBs
NCBI-GeneID: 122594865
NCBI-ProteinID: XP_043623099
LinkDB
Position
4:42346386..42353942
AA seq 193 aa
MSIVSQIVSQRSDALSKLGVMTVLNNYDEARLVCVSSDGRMFAVSAMESGFLKHFIDTKQ
FGKVYTEVPGHILEQVVYFIINIKYEERNTENYKVLESEFLQKNQRLLLDILLVAYDLQI
QTLVDLVRKVVIDMIAEKTREEFAEIFNLSREEMSEMQKYKVWAIKPQERYFHVLETHSY
TSVYVMLFGNFQI
NT seq 582 nt   +upstreamnt  +downstreamnt
atgtcaatagtaagtcaaatagtaagtcaaagatccgatgcgctttcgaaattaggtgtt
atgaccgtgctaaataattatgacgaggcgcgtctggtgtgtgttagttccgacggtcga
atgttcgcggtgtctgccatggagtctggatttttgaaacactttatcgacactaagcaa
tttggaaaagtctataccgaagtcccaggccatattcttgaacaagttgtctactttatt
attaacataaaatatgaggagcgcaacactgagaattataaggttttggaatccgaattt
ctccaaaagaatcagcgccttcttttggatattttgctagttgcttacgatctccaaatc
caaacccttgttgacctggtgcgtaaagtagttattgatatgatagcagagaagactcgt
gaagagtttgctgagattttcaacctgagtcgtgaagagatgtcagagatgcagaaatat
aaagtgtgggctattaagcctcaagaaaggtattttcatgttcttgagacacattcttat
acctctgtatatgtgatgttgtttggtaattttcaaatataa

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