Erigeron canadensis (horseweed): 122594975
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Entry
122594975 CDS
T07610
Name
(RefSeq) pleiotropic drug resistance protein 1-like
KO
K08711
ATP-binding cassette, subfamily G (WHITE), member 2, PDR
Organism
ecad
Erigeron canadensis (horseweed)
Pathway
ecad02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
ecad00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
122594975
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ecad02000
]
122594975
Transporters [BR:
ecad02000
]
ABC transporters, eukaryotic type
ABCG (White) subfamily
ABCG2, 3 subgroups
122594975
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC2_membrane
ABC_tran
PDR_assoc
ABC2_membrane_7
AAA_21
ABC_trans_N
ABC2_membrane_3
AAA_16
AAA_28
AAA_29
AAA
AAA_25
AAA_33
RsgA_GTPase
nSTAND3
ABC_ATPase
DnaB_C
DO-GTPase1
Motif
Other DBs
NCBI-GeneID:
122594975
NCBI-ProteinID:
XP_043623193
LinkDB
All DBs
Position
4:complement(43842743..43850372)
Genome browser
AA seq
1432 aa
AA seq
DB search
MDGSDIYKASRSIRFGSLRAASNGRMGSLRSGSSSIWRNSGMDVFSRSVREEDDEEALKW
ASIEKLPTFNRLKKGLLFGSSGPSQEVDVDNLSFVDRKRLLDRLVNVADDDNEKFLLKLR
NRIDRVGIELPTIEVKYEHLTVEADVNTGSRALPSFINFHIDIFEIFLSLFRLLPNSKKH
ITILDDISGIIKPSRMTLLLGPPSSGKTTLLLALAGKLDKKLKSSGRVTYNGHKLNEFVP
ERTSAYISQNDVHIGEMTVRETLAFSARCQGIGTRYEMLAELLRREKDANIKPDPDIDVF
MKAAASEGQEANVVTDYALKLLGLDICADTMVGDQMIRGISGGQRKRVTTGEMIVGPSKV
LLMDEISTGLDSSTTFQIVKSLKQLTHILEGTTVISLLQPAPETYDLFDDIILLTEGKIV
YQGPRDNVLDFFKFMGFQCPERKGVADFLQEVTSKKDQQQYWMRRSQNYRFVTAKEFSDS
FQSFHIGKRLKDDVGTPYDKSKSHPAALTTENYGLNKKELLKACIDREILLVKRNSFVYI
FKLSQLFIMAVMSMTVFFRTKMHRDDIEDGGIYTGALFFGVAMIMFNGMSEIPMTIAKLP
VFYKQRDFYFYPSWAYALPSWVVKIPVSFLEAGLWTILTYYVIGFDPKITRFFRQYLLLL
LINQVSSALFRSIGALGRNMIVANTFGSFALLLIFALGGFVLVRDDVKKWWIWGYWSSPM
MYAMNGIVVNEFMTDRWNKASYSYETTLGKAIITSRGLFAETYWYWISILASIGFIFLLN
LCFGLSLEFLDPFGQSRSTVSTEPNSENSVELSPTDERNRSKKKGMILPFEPHSITFNDV
NYSVDMPQEMREQGTDEDRLLLLKSVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTSG
YIEGDIRISGYPKKQETFARISGYCEQNDIHSPHVTVYESLVYSAWLRLPPDVNENTRKM
FVEEVMELVELHSLREALVGLPGTNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDAR
AAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVGPLGRNSCQLI
QYFEDIPGVSKIKNGYNPATWMLEVTTTAQEIALGVDFAEIYKNSELFQRNKALIAELSV
ARPGTNDLYFATQFSQPFSVQCIACLWKQRLSYWRNPPYTAVRFAFTTFIAVMFGTMFWD
LGRKRKTPQDLSNAMGSIYAATLFLGVQNSSSVQPVVDIERTVFYRERAAGMYSALPYAC
AQLLVEIPYVLSQCVVYTLIVYAMIGFEWTASKFFWYLLFQFFSLLYMTFYGMMTVAITP
NNNIAAIVAASFYGFFNLFSGFIIPRPKIPVWWRWYYWCNPMAWTIYGMVVSQFGDYDDL
LLDGETVKGYLHRYFGYKHSFLGTIAGVHVGLAIAFGFIFAICIKTFNFQKR
NT seq
4299 nt
NT seq
+upstream
nt +downstream
nt
atggatggaagtgacatttataaagctagtaggagtataaggtttggtagtttaagagca
gctagtaatggaagaatggggagtttaagatctggaagtagttctatatggaggaactcg
ggaatggatgttttttcaagatctgtccgcgaagaggatgatgaagaagctcttaaatgg
gcttccatcgagaaactcccaacatttaatcgtttaaagaaaggcttgctctttgggtca
agtggaccttcacaagaagttgatgtagacaatcttagttttgtagatcgaaagcgatta
cttgataggcttgtaaatgttgctgatgatgataatgagaagtttttgttgaagctcagg
aacagaattgacagggttgggatcgaattacctaccattgaagtcaagtatgagcatttg
acagtggaggcagatgtgaacactggaagcagagctttacctagttttataaatttccac
attgatatctttgaaatattcttgagcttattccgcctgctgcctaattcgaaaaagcat
ataaccatccttgacgatattagtgggatcatcaagcctagtagaatgactttacttttg
ggccctccgagttctggaaaaacaacattgttgttagccttggctggcaagctcgataag
aaacttaaaagctctgggagggtgacatataacggccataagttaaatgagtttgtacct
gaaagaacctctgcttatattagtcaaaacgatgttcatattggagaaatgactgttaga
gaaaccctggcattttctgcacgatgccaagggatcggaacacgttatgaaatgttggct
gagttattaagaagagagaaagatgcaaacatcaaacctgatccagatattgatgttttc
atgaaggcagctgcatcggaaggtcaagaggcaaatgtagtgacagattacgctctcaag
ttgttggggttggatatttgtgcagatactatggtaggcgatcaaatgataagaggtatc
tcaggcggccaaaggaagcgtgttacaacaggtgaaatgatagttggaccatcaaaggtt
cttcttatggatgagatatctaccggtttggacagttctacaactttccaaattgtgaaa
tcgctcaaacaacttactcatatccttgaaggaactactgtcatttcacttctccagcca
gcacccgagacatatgatttatttgatgacattatccttttaactgaggggaaaatagtt
taccaaggaccacgggacaatgtgcttgatttttttaaatttatggggttccaatgccct
gagagaaaaggtgttgctgacttcttgcaagaagtgacttctaagaaagatcaacaacaa
tactggatgagaagaagccagaactacagatttgtgactgccaaggaattttccgactct
ttccagtctttccatattgggaagaggctcaaggatgatgttggaaccccatatgacaaa
agtaaaagccacccagccgctcttaccaccgagaactatggtttaaataaaaaagagctt
ctgaaagcatgcattgatagagagatcttgcttgttaagagaaattcatttgtttacatc
ttcaaattatcccagttatttatcatggcagtcatgtccatgactgtgtttttccgaact
aagatgcatagagatgatatagaagatggcgggatatatactggtgctctgtttttcggt
gtggctatgatcatgtttaatgggatgtctgagattccaatgacaattgcaaagcttcct
gtattctacaagcaaagagacttctatttttacccttcgtgggcctacgctcttccatca
tgggtcgtcaagattccggtttctttcctagaagctggcctatggacaattctcacttac
tatgttataggatttgatcccaagatcacaagattcttccgacaatatcttttactttta
cttattaaccaggtgtcttctgcattgtttcgatctatcggggcattaggtcggaacatg
attgttgcaaacactttcggttcatttgcacttctcttgatctttgcattgggtggcttt
gtcctagtacgagatgatgtgaagaagtggtggatatggggatactggtcatctccaatg
atgtatgcgatgaatgggatcgtagttaatgaattcatgacggacaggtggaataaggca
agttactcttacgaaacaacactagggaaagctatcatcacttctcgagggttgttcgca
gaaacttactggtattggatttcgatcttggcatccattggattcatttttctcctcaat
ttatgtttcggtttgtctctcgagtttctcgacccttttgggcaatcacgatcgactgta
tcaacagagcctaatagtgagaactctgttgagttatcacctacagatgagagaaatcga
agcaagaaaaaaggaatgattcttcccttcgaaccacattcaattacctttaatgatgtc
aactactctgtcgatatgcctcaggaaatgagagaacaaggaacagatgaggatagattg
ctgctacttaagagtgtgagtggagcttttcgacctggtgtattaaccgcactaatgggg
gtgagtggtgcgggaaaaactactctgatggacgttttagcaggtagaaaaacgagcggt
tatatagaaggtgatatccggatttcagggtatccaaagaaacaggaaacatttgctcgg
atatctggatattgtgaacaaaatgacatccattctcctcatgttactgtttatgaatcc
ttggtgtactcagcttggctaaggttgccaccagatgttaatgaaaacaccagaaagatg
tttgtggaagaggtgatggagcttgtcgaattacattcgttgagagaggcattagtaggg
ttgcctggtaccaatggactctctacagaacagcgaaaaaggttgaccatagcagttgag
ctcgtggctaatccatctataatatttatggatgagccaacatctggactagatgctaga
gctgctgcaattgtgatgagaactgttaggaacacggttgacacaggaagaacagttgtg
tgcaccattcatcaacctagcatcgatatatttgaagcttttgatgagctattcttgatg
aaaagaggagggcaagaaatatatgtaggacctctgggcaggaattcttgccaactgata
cagtactttgaggatatcccaggggtaagtaaaataaaaaacggatataatcctgcgacg
tggatgttggaagtcactaccacagctcaagaaatagctctaggagttgattttgccgaa
atatacaaaaattcagaactatttcagagaaacaaggctcttattgctgaactaagtgta
gcacgtccgggaaccaatgatctctattttgcaacccaattctcacagcctttctctgtc
caatgtattgcttgtctatggaaacaacgtctgtcatactggagaaacccaccttacact
gcagtccgttttgctttcactacctttatagcagtcatgtttggcaccatgttctgggat
cttggccgtaaaaggaaaaccccacaagatctatctaacgcgatgggttccatctatgcg
gcaactctctttcttggagtccaaaattcatcatcagtgcagccggtcgttgacattgag
cgcacagtcttttacagagaacgagctgcagggatgtattccgctttaccatacgcttgt
gctcagcttctggtggagataccttatgttctgtcgcaatgcgttgtttacactctcata
gtttacgctatgattggatttgaatggacagcttccaaattcttttggtacttgttattc
cagtttttctctttactctacatgacgttttatggcatgatgactgttgccatcacccca
aacaacaacattgccgccatcgtagcagcttctttttacggcttctttaacttgttctct
ggtttcatcatcccaagaccgaaaattcctgtgtggtggcgatggtactactggtgtaac
ccgatggcgtggactatttacggcatggtggtatcgcagttcggcgactatgatgacttg
cttctcgacggagagactgtgaagggatacctgcatcgatattttggatacaaacatagc
tttcttggtaccatagccggagtgcatgtgggattagctatagcttttggatttatattt
gctatttgcattaaaaccttcaatttccagaagagatag
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integrated database retrieval system
