Erigeron canadensis (horseweed): 122595074
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Entry
122595074 CDS
T07610
Name
(RefSeq) eukaryotic translation initiation factor 3 subunit C
KO
K03252
translation initiation factor 3 subunit C
Organism
ecad
Erigeron canadensis (horseweed)
Brite
KEGG Orthology (KO) [BR:
ecad00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
ecad03012
]
122595074
Translation factors [BR:
ecad03012
]
Eukaryotic type
Initiation factors
eIF-3
122595074
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
eIF-3c_N
PCI
Motif
Other DBs
NCBI-GeneID:
122595074
NCBI-ProteinID:
XP_043623304
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All DBs
Position
4:complement(41552941..41558284)
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AA seq
922 aa
AA seq
DB search
MASRFWSNQADSETESEASDYDQDDVNDGPEEATNAPDRNKYLDNDDTDSDDDDMHKRVI
KSTKDKRVEELSSTIDQMKNAMKINDWVSLQESFDKINRQLEKVIRVNESDKAPNNYIKA
LVMLEDFLNQAMANKEAKKKMSSSNAKAFNAMRQKLKKNNKLYEELINKCRENPKSFEDQ
EEEEPSEDEDSEDYGTEIDDPTKEDSESDDGDDNDNNEDNDENQPGWEKMMNKKDKLMEK
QFKDPSQVTWETVNKKFKEVVAARGRKGTGRLELVEQLTFLTKVAKTPAQKLEILFSVVS
AQFDVNPGLSGHMPINVWKKCVENMLVILDILEQYPNILVDDTVEPDENETQKGMDYKDT
IRIWGNLAAFLEKIDIEFFKSLQCLDPHTREYVARLQDEPLFFVLAQNVQSYLERVGDHK
AAAKVALKLVELVYYKPQEVYGAMRNLADRSEAVDNEEIAATDSKVGPPAFVNTPEIVPR
KPSFPTSSRALMDILVSLIYKHGDEKTKARAMLCDIYHHAILDEFCIARDLLLMSHLQDS
VQQMDISTQILFNRSMAQLGLCAFRAGLVVEGHGCLSELYSGGRVKELLAQGVSQNRYHE
KTPEQERLERRRQMPYHMHINLELLEAVHLICAMLLEVPNMAANSHDARRKVISKTLRRH
LDSIDRQTFTGPPENVRDHVMAATRALSKGDFQKSFDVINSLDVWRLLKNRETVLEMLKN
KIKEEALRTYLFTYSASYETLKLEQLSKMFDLSESQTHCIVSKMMINEELHASWDQPTRC
IVFHEVEQTRLQGLAFQLTEKLSVLADSNERATGVRLGGGLESLPSRRGEGQDYASVAGG
NKWQDNQSYSQGRQQSSYGGGRPYGPGQGYQRGDRGGSRGGYQSTRYQDNAGSGRTYGGA
TARGSQMDGSNRMVSLNRGTRA
NT seq
2769 nt
NT seq
+upstream
nt +downstream
nt
atggcgtccagattttggagtaatcaggctgacagtgagaccgagtctgaagcgagtgat
tatgatcaagatgatgttaacgatggaccagaagaagctacgaatgcacctgacaggaac
aaatatcttgataatgatgatactgacagtgatgatgatgatatgcataagcgtgttatc
aagtctacgaaggacaagcgggttgaagagttgtcttcaactattgatcagatgaagaat
gctatgaagattaatgattgggttagtttgcaggagagttttgataagattaataggcag
cttgagaaggttatcagggttaacgagtctgataaggcaccaaataattacatcaaggcg
ttggtgatgttggaggattttttgaatcaagctatggcgaataaggaggcaaagaagaag
atgagtagtagcaatgcaaaggcgttcaatgctatgaggcaaaagttgaagaagaataac
aagctgtatgaggaattgattaataagtgtagggagaatccaaaaagctttgaggatcaa
gaagaggaagagccatcagaagacgaggattcggaggattatggcacagagattgacgat
ccgactaaagaagattcggagtcggatgatggggatgacaatgataacaatgaggataat
gatgaaaaccagcctggctgggagaagatgatgaataagaaagataagctaatggaaaag
cagtttaaggatccaagccaggtgacttgggagaccgtgaacaagaagtttaaggaggtt
gttgctgctcgtggtaggaagggaactgggcggcttgagctagttgagcaactgacattt
ttaacgaaagtagctaaaactcctgctcagaagcttgagatcttgtttagtgttgtctct
gctcagtttgatgtcaaccctggtctcagtggtcacatgcctataaacgtgtggaagaag
tgtgtagagaatatgcttgtcatacttgatattctcgagcaatacccaaatattctggtt
gatgacactgtggagcctgacgagaatgaaacccaaaagggaatggactacaaggatacc
attcgtatatggggaaacctggcagcttttcttgagaagatagacattgaattttttaag
agtctacaatgtcttgaccctcatacccgtgagtatgtagcgaggcttcaagatgaaccc
ttgttctttgttcttgctcaaaatgttcaatcatatctagaacgtgttggggatcacaag
gctgcagcgaaggtagcattgaagcttgttgaacttgtgtattacaaaccacaggaagtg
tatggtgctatgaggaacttggctgaccgatcagaagccgtagataatgaagaaatagca
gccactgattcaaaagtgggtccaccggcttttgtgaatactcctgaaattgtgcctaga
aagcctagttttccaacgagtagcagggctctgatggacattttggtttctcttatatac
aagcatggtgatgaaaagacgaaggctcgtgcaatgctttgtgacatttaccatcatgca
atcttggatgagttttgtatagctcgtgatttattgctaatgagtcacttgcaggacagt
gttcaacaaatggatatctcaacgcagatactttttaaccggtcaatggctcagcttggt
ttgtgtgcttttagggcaggtcttgttgttgaagggcatggctgtctctctgaattatat
tcagggggcagggtgaaagagcttcttgcacagggtgtttcgcagaatcgttatcatgag
aagacccctgagcaggaacgcttggaaaggagaaggcagatgccatatcacatgcacatc
aacctcgaacttctggaggctgtgcatttaatatgtgccatgctgctagaggttcctaat
atggcagcaaacagtcatgatgcaaggcgcaaagttataagcaagaccctacgccgtcat
cttgattccattgacagacagactttcactggtccgcctgaaaacgtgagggaccatgtt
atggcagcaactagagcccttagcaagggtgacttccagaagtcctttgatgttatcaat
tcacttgatgtctggagactccttaagaaccgtgaaacagtcctagaaatgctgaaaaac
aagatcaaggaagaagctcttaggacctaccttttcacatattcagcatcatacgagacc
ttgaaactggaacaactttcaaagatgtttgacctttcagaaagtcaaactcattgtatt
gttagtaagatgatgatcaatgaggagctccacgcaagctgggaccaacccacgcgatgc
attgtgttccatgaggtcgaacaaaccagattacagggactagctttccagttgactgaa
aagctctcggttcttgcagatagcaatgagcgggccactggggtgagactaggtggtggg
ttggagtctttaccgtctaggaggggggaaggccaggactatgcatctgttgctggtggc
aacaaatggcaagacaatcagtcttactcgcaaggaaggcagcagtccagttatggtggt
ggtcgaccctatgggcctggtcagggttatcaaaggggggaccgtggtggttctagaggt
gggtaccagagcacacggtatcaagataatgcaggttctggtcggacttatggtggtgca
actgctagaggtagccagatggatggctctaaccgcatggttagcctaaacagaggaact
cgtgcttag
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