Erigeron canadensis (horseweed): 122595116
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Entry
122595116 CDS
T07610
Name
(RefSeq) EIN3-binding F-box protein 2-like
KO
K14515
EIN3-binding F-box protein
Organism
ecad
Erigeron canadensis (horseweed)
Pathway
ecad04016
MAPK signaling pathway - plant
ecad04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
ecad00001
]
09130 Environmental Information Processing
09132 Signal transduction
04016 MAPK signaling pathway - plant
122595116
04075 Plant hormone signal transduction
122595116
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ecad04121
]
122595116
Ubiquitin system [BR:
ecad04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
122595116
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
LRR_6
LRR_4
LRR_At5g56370
LRR_RPS2
F-box
F-box-like
Motif
Other DBs
NCBI-GeneID:
122595116
NCBI-ProteinID:
XP_043623364
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Position
4:complement(38973870..38977107)
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AA seq
621 aa
AA seq
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MPALVNYRGDDDYHTGGSLCSKDSARLLSVYGPPCKRQRISDSYFIFFEEEKQPSINVLP
DECLYEIFRRLPGGQARSAAACVSNHWLSVLSSIRNSEIDNGSSSDVEMISQENDGFLTR
CVEGKKATDNRLAAIAVGTSGRGGLGKLSVRATNKVTKLGFSAIARGCPSLKVLSLWNVP
SIGDEALIEISKECHLLEKLDLSHCPSISNKGIAAIAENCPNLSSLTIEFCKNIGNESLQ
AVARGCPNLQSITIKDCPNVGDQGVATLLSAPSSVLKKVKLQSLNITDFSLAVIGHYGKS
VTSLSLIGLQTASQKGFWAMGNAKGLQSLTSLSIISCYGITDLSLEAIGNGCCFLKQMLL
KKCCFVSDKGLTSFTEAAESLECLQLEECNRVSQHGIMSALKSKLKSLTIVKCMGIKDLA
HEAPADLTQCGSLRSLTIKDCIGFGNTSLSIVGTLCPQLQNLELSGLCGITDSDLVPLLE
NCNAGLVKVNLSNCPNLTDKIVVDLARIHGGTLKTLNLEGGRKITDVSLMAIAENCAFLN
DLDISRCGITDMGVSSLSDGVQIDLQILSLSGCSKISNKSTPYLKKLGQTLVGLNIQQCN
LISSSAVDLLVENLWRCDILY
NT seq
1866 nt
NT seq
+upstream
nt +downstream
nt
atgcctgcgttggttaattacaggggagatgatgattaccataccggtggatcactctgc
tcaaaagattcagcccgtttgctttcggtctatggaccaccttgcaaacgtcaacgaatc
agtgattcatattttatcttctttgaagaagaaaaacaaccatcaatcaatgtccttcct
gatgaatgtctttacgaaatctttagacgcttacccgggggccaagctaggagtgctgca
gcctgtgtctcaaaccattggctctcagtcctaagtagcattaggaactcagagatagat
aatggatcatctagcgacgttgagatgatctctcaagagaatgatgggtttcttactaga
tgtgtagagggaaagaaagcaacagataacagacttgcggccattgcagtcgggacgtct
ggtcgtggtggtttgggcaagctttcggttagggcaactaataaagttaccaagttaggg
ttctccgcaattgcacgtggctgcccttcattaaaggtgctttctttatggaatgttcct
tcaattggggatgaagctttgatcgagatctctaaagaatgccatttgctagaaaagcta
gatctttctcattgtccttcaatttccaacaagggtattgccgcaattgctgaaaactgc
ccaaatttgtcgtctttaacaatcgagttttgtaaaaacatcgggaatgagagtcttcaa
gctgttgcccgaggctgcccaaatctacagtcgattaccattaaagattgccccaatgtc
ggggaccaaggagtcgctacactcttgtcagccccttcttcagttctaaagaaagtaaag
ctccaatctttaaacataacagacttctcacttgctgtgatcggacattatgggaagtcg
gttaccagtcttagccttattggtcttcaaactgcttctcagaaaggattttgggcaatg
ggtaacgctaaaggtcttcaatctttgacgtccttgtccataatctcgtgttatgggatt
acagatctgagccttgaagcgatcggaaatggatgttgttttttgaaacagatgttgctt
aaaaagtgttgctttgtatccgacaaaggattgacatctttcactgaagctgctgaatct
ctcgaatgtttgcagttggaagaatgcaatagagtcagtcaacacgggatcatgagtgct
cttaagtcaaaactgaagtctttaacgatagtcaagtgtatgggaatcaaagatttggcc
catgaagcacccgctgatttgacccagtgtggatcacttcgatctttgaccatcaaagat
tgtattgggtttggaaacactagcttgtcaattgtcggaaccttatgcccacagctgcaa
aaccttgaacttagcgggctttgtggaataactgattctgatctggtcccacttctcgaa
aactgcaacgccggactcgtgaaagtcaacctaagcaattgcccaaacttgaccgacaag
attgtggtggatcttgctaggattcatggtggaactctaaaaaccttgaatcttgaaggt
ggtaggaagatcactgatgtaagtttgatggcaatcgcagaaaactgtgcgtttctcaac
gaccttgatatttcaaggtgtggtatcaccgatatgggagtatccagtttgtctgacggg
gtccagattgacttgcaaatcctttcgttgtcaggttgttccaagatttccaataaaagt
acaccttatttaaagaaactcggccaaaccctagttggattgaacatccaacaatgcaat
ctcatcagcagtagtgcggtcgatttactagtcgagaatctttggaggtgtgatatcctt
tattaa
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