Erigeron canadensis (horseweed): 122595119
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Entry
122595119 CDS
T07610
Name
(RefSeq) E3 ubiquitin-protein ligase RHF1A-like
KO
K19043
E3 ubiquitin-protein ligase RHF [EC:
2.3.2.27
]
Organism
ecad
Erigeron canadensis (horseweed)
Brite
KEGG Orthology (KO) [BR:
ecad00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ecad04121
]
122595119
Enzymes [BR:
ecad01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
122595119
Ubiquitin system [BR:
ecad04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
122595119
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-C3HC4_2
zf-rbx1
zf-C3HC4
zf-RING_UBOX
zf-RING_11
zf-RING_5
zf-ANAPC11
zf-C3HC4_4
zf-C3HC4_3
zf-Nse
Motif
Other DBs
NCBI-GeneID:
122595119
NCBI-ProteinID:
XP_043623368
LinkDB
All DBs
Position
4:complement(42181759..42185511)
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AA seq
350 aa
AA seq
DB search
MESSSSSSSSMATADKPIMHIDDDQQDVCSICLDSFDSHHNPPTVTTCKHEFHLQCILEW
SQRSQECPICWQVIVLKDPASQELLSMVEDERKGRSVLKVHNISVDRQVDHVVEYDDSDT
DEQVFRTFESASSMRYVKRRNRERLSRIGPSTADVPIRQEIYTPLEEFHSLGYASSHDTL
ASSSSMSTSIDQTSPSAGSSTTVVTPGTRDCTIKSRVHNSQSPNGSPGRPIAADMHAFSE
SVKSKFSAASARYKNSISKSTQSLKEKLLATNSPVKELSRGVQREMSAGIAGVARIFERL
DPTLKRSSDGVNSNFFKGKCTQDNVIASPVHGNSADAIGNVSSNIGTMHL
NT seq
1053 nt
NT seq
+upstream
nt +downstream
nt
atggaatcatcatcatcatcatcatcatcaatggcaacagcagataaacccattatgcat
attgatgatgatcaacaagatgtttgcagtatttgtcttgattcttttgattctcatcat
aacccccccactgtgacaacttgcaagcatgagtttcatcttcagtgtatccttgagtgg
tcacagagaagccaagaatgcccaatatgttggcaggtgattgtgttaaaagatccagcc
agtcaagagcttctatctatggtggaggatgaaagaaaggggaggtctgtgcttaaggtt
cataatatatccgtggatcgtcaagttgatcatgttgtcgaatatgatgattctgataca
gacgagcaagtttttagaacttttgagtcagctagcagtatgcgctatgttaagagaagg
aacagggaaagactttcacgaattggtccttctacagcagatgtgccaattcggcaggaa
atatataccccacttgaagagtttcacagtttaggctatgcttcatcccacgatacttta
gcgagttctagctcgatgtccacttctattgatcaaacttcaccttctgctggttcatcc
accactgttgtgactcctggcactagagattgcacaatcaaatctagagttcataatagc
cagtcaccaaatggtagcccaggaagacccatagccgctgatatgcatgcattctccgag
tctgttaaatccaagttttctgctgcttcagccaggtataagaactcaatctcaaaaagc
acccaaagtttaaaggagaaattactggctacaaatagtccagttaaagaattaagtaga
ggagttcagcgagaaatgagtgcaggaattgctggagttgctagaatctttgaacggttg
gaccctactttaaaaagaagcagtgatggagtaaactcgaacttttttaaagggaaatgt
acacaggataatgtgatagcttcacctgttcatggaaactctgctgatgctattggaaat
gtgagttcgaatataggaactatgcatctctaa
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