Erigeron canadensis (horseweed): 122595120
Help
Entry
122595120 CDS
T07610
Name
(RefSeq) interaptin-like
Organism
ecad
Erigeron canadensis (horseweed)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NT-C2
AAA_13
Shugoshin_N
Motif
Other DBs
NCBI-GeneID:
122595120
NCBI-ProteinID:
XP_043623373
LinkDB
All DBs
Position
1:complement(54052287..54058915)
Genome browser
AA seq
1195 aa
AA seq
DB search
MFQAQRNGKSQSSGERIDFKFTNFQALQVPKVWDKLLVSIISVETGKTIARSNKALVRNG
SCQWTETISESIWISHYDSSKELEEHLFKFVVSMGSARSGILGEATVNIARYYTSSRSSA
PVSLPLKKCSYGTILQVKIQCLTPRTKLRYITMVIEDYDDAGSKSLESAASLNLSAKSSS
SQDLAPTSLLERIKKMEKTYEPSGSNQNNDSDEYSLEKERFYRKSHTNGIKNNLNASSRN
SSPRSNYQIEEELSMSKSNNSSFKSRITHDEQEQSYEETPPAVLPTSSVTNVGASKNLLE
AAEDTIEELRDEAKRWERNSQKLMLDLEILKEKFSDQSKNLAEVQMELSTAHAERDGMKK
EVDHIKMLLEESVLRQKATVESRSTYNSEGQSQLLKELENELKSHKTSNTDLAQQLKRNQ
ESNIELVCILQELEEMTETQKAEIEELLVVKSKFSDLEKSFNNNLVETRSLQLKLQQMEE
SEKTLHANLQILEQALENKISDLEHERTSSSQTISVLEKEYKTTLSIKEEDISNLELKLS
SCIKESKDIEADQMQEIQSLKQKVSEIEKECSELTNENFELLCELKESKKILQENMEDAL
NESNITSKCLDNLRNDLMVLSSSVDSQVSANKLLERKALDLEKAKGEVELRLFEMEEKNI
KLLERVSELESEVRWVKNEHEKIQMEFVKSEKEKLQESAENLIEECNTLQKSYEDMTKGK
SKLYEECSRLEIELKEASKNLVISSERVADLEEKNSSMLEEHMFKEKSLSSHLDELNQEN
WKLKEKVTMEESLLNQMYLEKTAEIESFQKEVEQLKEEMSEALQEIKSLSSEKSKLESSL
KEVNSRREVTENELQTLREESELKIRDLTAELASIKQNYKKLTADHEKKSKLLSGYRTRE
ERRKTMENDLELKLTISEYERQQLIEEAANLKDKMHKTLNLENELLDHKQKLDKLKNEKS
YLEASLRSVSSSFEELNAEKVSLLKKMSEHEDCKSQRKALEEKLMKVEGDVTAKSASRLQ
DADMKNEISRIKSVNLQYQLKVQQLEGEKNEFIKKVHALEEDLKLLSAKTKMGGLEIRSQ
EDIDYAAKIEMLEAELDEALDANNKYRVQLQRLKTEGRNSLSSVPGKSKVEGEVVTKERF
ERTKSSLETELKDLRDRYLEMSLKYAEVEAEREDLVMQLKTNSSTRKRFQFIDNP
NT seq
3588 nt
NT seq
+upstream
nt +downstream
nt
atgtttcaagcacaaagaaacgggaagtcgcagagctcaggagagaggattgatttcaaa
tttacaaactttcaagctcttcaggtaccaaaggtatgggacaaacttttagtatcgata
atctcagtggaaacaggaaaaacaattgcacgatcaaataaagctctggtgagaaatggg
agttgtcaatggacagaaacgatatccgagtctatttggatttcacattatgactcttca
aaagagcttgaagaacatcttttcaagtttgttgtttccatggggtctgcgagatctggt
attcttggtgaggcaaccgtcaatattgctcgttactatacaagttcaagatcatctgcc
ccagtttcattgccattgaaaaaatgcagctacggtacaattttacaggtcaaaatccaa
tgtctaacaccaagaacaaaactaaggtacattactatggtaattgaagattatgatgat
gcgggtagcaaatcacttgagtctgctgcctctcttaacctcagtgctaaatcctcttca
agtcaagacctggctcccacttcacttcttgaaagaatcaaaaaaatggaaaaaacttat
gagccatctgggtcaaatcaaaacaatgattcggatgaatattctttagaaaaggagagg
ttctatcgaaaaagtcatacgaatggaatcaagaacaatcttaatgcaagctcccgaaac
agttctcctcgaagtaattaccaaattgaagaagagctttccatgtcaaaatcaaacaac
tcatctttcaaatcaagaataacccatgacgaacaagaacaatcttatgaagaaacccct
ccagctgttcttcccacatcatctgtgacgaatgttggtgcttcaaaaaaccttcttgaa
gcagctgaagacacaattgaagagcttcgtgatgaggccaaaagatgggagagaaattca
cagaagttaatgctcgatttggagattttaaaagagaaattctccgatcagtcaaaaaat
ctggctgaagttcaaatggagctttctacagcacatgctgaacgtgatggaatgaagaaa
gaagttgatcatataaagatgctgctagaagaatcggtgctcagacaaaaggccacagtg
gaatcaaggtcaacgtataactctgagggtcaaagccaacttctaaaggaacttgaaaac
gagctaaaatctcacaaaacatcgaatactgatttggctcaacaactaaagagaaatcaa
gagtcgaatatagagcttgtgtgtattcttcaagaactggaggaaatgactgaaacgcaa
aaggcggaaattgaagaacttttggtggtcaagtcaaagtttagcgatttagagaagtct
ttcaacaacaatttggtggaaaccagaagcttacaacttaaattgcaacaaatggaggaa
tcagagaagactttacatgctaatttgcagatccttgaacaagcattagaaaacaaaatc
agtgatttagaacacgagcgaacttcaagtagtcaaactatttcagttcttgaaaaggaa
tacaaaactaccttatctatcaaagaagaagatatcagcaatttggagttgaagctatca
tcatgtataaaggaaagcaaggatattgaagcagatcaaatgcaggaaatccaaagtttg
aaacaaaaagttagtgagattgaaaaagaatgtagtgagctaacgaatgaaaactttgaa
cttctttgtgagcttaaagaatcaaagaaaattctacaagaaaacatggaagatgctttg
aatgaaagcaatataacctctaaatgtttggataatttaagaaatgatcttatggtgctt
agcagcagtgttgattcacaagtttctgctaacaagttacttgaacggaaagcgttggat
cttgaaaaagctaagggtgaagtcgagcttcgcttgtttgaaatggaagaaaaaaacatc
aagttattggaacgtgtgtctgaattagaaagtgaagtaagatgggtcaaaaacgagcat
gaaaagatccaaatggaatttgtgaaatctgaaaaggagaaactgcaagaatctgctgag
aatctcattgaggaatgcaatactcttcagaagtcgtatgaagatatgacaaagggaaag
tcaaagttgtatgaagaatgttcacgtttagagatagaattaaaggaagccagcaagaat
ttggttatttcttctgagagggtagccgatttagaagaaaagaattcttctatgctggaa
gaacatatgtttaaagaaaagagtctttcttcacatttggatgaacttaatcaagaaaac
tggaaactaaaagaaaaggttacaatggaagaaagtttgttgaaccaaatgtacttagag
aagacagccgagattgaaagtttccaaaaagaggtggaacaactcaaagaagaaatgtca
gaagctttacaagaaatcaaaagcttaagttccgagaaatccaaattagaatcttctctc
aaagaagttaattcaagaagagaagtgactgaaaatgagcttcaaactcttcgtgaggaa
tctgaattgaagattcgagatctaacagccgagcttgcttctataaaacaaaactataag
aagctgactgctgatcacgaaaaaaagtcaaagttgttaagtggttacagaaccagagaa
gagcggagaaagacaatggagaatgatcttgaacttaaacttacaatttctgaatatgaa
cgccaacaactcattgaggaagctgcaaatctaaaagataagatgcataaaactttgaat
cttgaaaatgaattattggatcataaacaaaagcttgataagttaaagaacgaaaagagt
tatcttgaagcttctcttcgttcagtttcaagtagttttgaagagcttaatgctgagaag
gtgtctcttctgaaaaagatgtccgagcatgaagattgtaaaagtcagagaaaagcattg
gaagaaaagctaatgaaagtagagggggatgtaacggctaaaagtgcatcccgtctgcag
gatgcagatatgaaaaacgagattagcaggatcaagagtgttaatttgcagtatcaactg
aaagttcaacagcttgaaggggaaaagaatgaattcataaagaaagtccatgctctcgag
gaagatctaaaactactttcagccaaaactaaaatgggtggtcttgagattcgttcacaa
gaagatattgattatgctgccaaaatagagatgcttgaagcagaacttgatgaggctctc
gatgcaaataacaagtacagagttcaacttcaaaggctaaagacagaggggcgtaatagt
ctttcatcagttcctgggaaatcaaaggttgaaggtgaagtagtaaccaaagaaagattt
gaacggacaaagtcatctctggagacagagcttaaagacctccgtgaccgttatcttgag
atgagcctaaagtatgctgaagtagaagccgaaagagaagatcttgtaatgcagttaaaa
acaaacagcagtactaggaaacgattccaattcattgacaacccatga
DBGET
integrated database retrieval system
